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  5. GSVIVT01008093001

GSVIVT01008093001


Description : External stimuli response.light.UV-A/blue light.cryptochrome-mediated photoperception.CIB transcriptional regulator


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008093001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00137860 BEE3,... External stimuli response.light.UV-A/blue... 0.02 OrthoFinder output from all 47 species
AT4G28790 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G30980 LRL2 LJRHL1-like 2 0.04 OrthoFinder output from all 47 species
Adi_g007889 LRL1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21170 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26066 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Ala_g26607 RSL2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12831 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene05129.t1 RSL2, Aspi01Gene05129 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28112.t1 PIF3, POC1,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0083.g038807 HEC1 bHLH-type transcription factor & original description: CDS=1-1287 0.04 OrthoFinder output from all 47 species
Azfi_s0090.g042718 RSL2 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.04G038900.1 LRL3, Ceric.04G038900 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.07G026100.1 LRL3, Ceric.07G026100 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.17G079100.1 Ceric.17G079100 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g09150 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16366 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018164001 UNE10 Transcription factor UNE10 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01018165001 UNE10 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01026056001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Gb_07156 PIF3, POC1, PAP3 transcription factor (bHLH). PIF red/far-red light... 0.05 OrthoFinder output from all 47 species
LOC_Os02g47660.1 CIB1, LOC_Os02g47660 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
LOC_Os05g46370.1 LOC_Os05g46370 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Lfl_g08868 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Lfl_g10731 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g21331 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Nbi_g03137 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Pir_g58445 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013831 SPT bHLH-type transcription factor & original description: CDS=1-1485 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018719 LRL3 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g23139 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g062690.3.1 BEE2, Solyc02g062690 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc03g034000.3.1 BEE2, Solyc03g034000 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc03g119390.4.1 BEE3, Solyc03g119390 transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
Solyc04g005130.3.1 Solyc04g005130 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc04g007300.4.1 BEE3, Solyc04g007300 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc05g006650.3.1 Solyc05g006650 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Solyc06g062460.3.1 Solyc06g062460 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc09g065820.4.1 UNE12, Solyc09g065820 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc10g018510.2.1 UNE10, Solyc10g018510 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Spa_g03670 RSL2 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50491 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13758 CIB1 regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Tin_g31873 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000921_P005 Zm00001e000921 transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008272 sulfate transport IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 152 199
No external refs found!