Aliases : TCP5
Description : RNA biosynthesis.transcriptional activation.TCP transcription factor
Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00158020 | TCP4, MEE35,... | RNA biosynthesis.transcriptional activation.TCP... | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00154p00072430 | TCP13, TFPD,... | RNA biosynthesis.transcriptional activation.TCP... | 0.06 | OrthoFinder output from all 47 species | |
| AT1G30210 | ATTCP24, TCP24 | TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 | 0.05 | OrthoFinder output from all 47 species | |
| AT1G68800 | TCP12, BRC2 | TCP domain protein 12 | 0.04 | OrthoFinder output from all 47 species | |
| AT2G31070 | TCP10 | TCP domain protein 10 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G02150 | TCP13, TFPD, PTF1 | plastid transcription factor 1 | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g28771 | TCP3 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g30836 | TCP10 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g18510 | ATTCP24, TCP24 | TCP-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g30415 | TCP2 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g18877 | TCP4, MEE35 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07553 | TCP3 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene50266.t1 | TCP2, Aspi01Gene50266 | TCP-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene52180.t1 | TCP3, Aspi01Gene52180 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene55158.t1 | TCP5, Aspi01Gene55158 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene55173.t1 | TCP2, Aspi01Gene55173 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0538.g076302 | TCP3 | TCP-type transcription factor & original description: CDS=1-1575 | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g07001 | TCP3 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008234001 | TCP12, BRC2 | RNA biosynthesis.transcriptional activation.TCP... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01021167001 | TCP3 | RNA biosynthesis.transcriptional activation.TCP... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01036449001 | TCP1 | RNA biosynthesis.transcriptional activation.TCP... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_07891 | ATTCP24, TCP24 | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_17863 | TCP3 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_35810 | TCP2 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_38376 | TCP2 | transcription factor (TCP) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os01g11550.1 | TCP4, MEE35,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g55750.1 | TCP5, LOC_Os01g55750 | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g49880.1 | TCP12, BRC2,... | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g33530.1 | BRC1, ATTCP18,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| MA_101752g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_16704g0010 | TCP2 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| MA_35349g0010 | TCP2 | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| MA_78665g0010 | TCP2 | transcription factor (TCP) | 0.07 | OrthoFinder output from all 47 species | |
| MA_86651g0020 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g48155 | TCP3 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g33965 | TCP10 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g41668 | TCP4, MEE35 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g26630 | TCP2 | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g077250.2.1 | TCP4, MEE35,... | transcription factor (TCP) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc02g089830.2.1 | TCP1, Solyc02g089830 | transcription factor (TCP) | 0.08 | OrthoFinder output from all 47 species | |
| Solyc03g045030.2.1 | TCP12, BRC2,... | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g119770.4.1 | TCP12, BRC2,... | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g069240.2.1 | TCP12, BRC2,... | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g008780.1.1 | TCP10, Solyc10g008780 | transcription factor (TCP) | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e005407_P001 | TCP12, BRC2,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e009811_P001 | BRC1, ATTCP18,... | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e032122_P001 | TCP5, Zm00001e032122 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004180 | carboxypeptidase activity | IEP | HCCA |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR017887 | TF_TCP_subgr | 111 | 174 |
| No external refs found! |
