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  5. GSVIVT01008284001

GSVIVT01008284001 (LBD40)


Aliases : LBD40

Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor


Gene families : OG0001073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008284001
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT1G67100 LBD40 LOB domain-containing protein 40 0.04 OrthoFinder output from all 47 species
AT3G02550 LBD41 LOB domain-containing protein 41 0.07 OrthoFinder output from all 47 species
Adi_g024595 LBD38 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082772 LBD37, ASL39 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08245 LBD38 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g20695 LBD37, ASL39 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11822 LBD38 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38372.t1 LBD38, Aspi01Gene38372 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13473 LBD38 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G068800.1 LBD37, ASL39,... AS2/LOB-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01011896001 LBD42 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 OrthoFinder output from all 47 species
Gb_36942 LBD40 transcription factor (AS2/LOB) 0.05 OrthoFinder output from all 47 species
Gb_36943 LBD40 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
LOC_Os03g33090.1 LOC_Os03g33090 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Lfl_g26418 LBD39 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_19934g0010 LBD40 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Solyc03g119530.3.1 LBD41, Solyc03g119530 transcription factor (AS2/LOB) 0.12 OrthoFinder output from all 47 species
Zm00001e001981_P001 LBD41, Zm00001e001981 transcription factor (AS2/LOB) 0.06 OrthoFinder output from all 47 species
Zm00001e005129_P001 LBD37, ASL39,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e027415_P001 LBD41, Zm00001e027415 transcription factor (AS2/LOB) 0.06 OrthoFinder output from all 47 species
Zm00001e027417_P001 LBD41, Zm00001e027417 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Zm00001e032150_P001 LBD41, Zm00001e032150 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 4 102
No external refs found!