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  5. GSVIVT01008827001

GSVIVT01008827001 (PMIT1, NRAMP1, ATNRAMP1)


Aliases : PMIT1, NRAMP1, ATNRAMP1

Description : Solute transport.carrier-mediated transport.APC superfamily.NRAMP metal cation transporter


Gene families : OG0000603 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000603_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008827001
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00273040 ATNRAMP2,... Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
Ala_g01807 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26408 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05824 ATNRAMP3, NRAMP3 metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G035200.1 PMIT1, NRAMP1,... metal cation transporter *(NRAMP) & original... 0.01 OrthoFinder output from all 47 species
Dde_g08044 ATNRAMP4, NRAMP4 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_30457 ATNRAMP3, NRAMP3 metal cation transporter (NRAMP) 0.04 OrthoFinder output from all 47 species
LOC_Os02g03900.1 PMIT1, NRAMP1,... metal cation transporter (NRAMP) 0.04 OrthoFinder output from all 47 species
Len_g29106 NRAMP6, ATNRAMP6 metal cation transporter *(NRAMP) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10430197g0030 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter (NRAMP) 0.02 OrthoFinder output from all 47 species
MA_124591g0010 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter (NRAMP) 0.01 OrthoFinder output from all 47 species
Mp7g11150.1 NRAMP6, ATNRAMP6 metal cation transporter (NRAMP) 0.02 OrthoFinder output from all 47 species
Nbi_g33813 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15087 PMIT1, NRAMP1, ATNRAMP1 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03067 ATNRAMP4, NRAMP4 metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06506 No alias metal cation transporter *(NRAMP) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g20656 No alias metal cation transporter *(NRAMP) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046873 metal ion transmembrane transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR001046 NRAMP_fam 67 428
No external refs found!