Aliases : PUM7, APUM7
Description : Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana
Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01009020001 | |
| Cluster | HCCA: Cluster_39 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00004p00065720 | APUM12, PUM12,... | Pumilio homolog 12 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g02611 | APUM12, PUM12 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene49914.t1 | APUM12, PUM12,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000500 | APUM8, PUM8 | not classified & original description: CDS=357-1181 | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020878.26 | PUM7, APUM7 | Pumilio homolog 12 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01038732001 | APUM8, PUM8 | Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g17736 | APUM12, PUM12 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g028800.3.1 | APUM12, PUM12,... | Pumilio homolog 12 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g073980.3.1 | PUM7, APUM7,... | Putative pumilio homolog 7, chloroplastic OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000685_P001 | PUM7, APUM7,... | Putative pumilio homolog 7, chloroplastic OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e024450_P001 | APUM12, PUM12,... | Pumilio homolog 12 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e039541_P001 | APUM12, PUM12,... | Pumilio homolog 12 OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| BP | GO:0006631 | fatty acid metabolic process | IEP | HCCA |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | HCCA |
| MF | GO:0016843 | amine-lyase activity | IEP | HCCA |
| MF | GO:0016844 | strictosidine synthase activity | IEP | HCCA |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | HCCA |
| No external refs found! |
