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  5. GSVIVT01009374001

GSVIVT01009374001


Description : Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade D phosphatase


Gene families : OG0000288 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000288_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009374001

Target Alias Description ECC score Gene Family Method Actions
AT4G33920 No alias Protein phosphatase 2C family protein 0.04 OrthoFinder output from all 47 species
Adi_g012578 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020745 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060830 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14755 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13539 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g22251 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24731 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G019800.1 Ceric.01G019800 clade D phosphatase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.06G064400.1 Ceric.06G064400 clade D phosphatase & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g07486 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02229 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_27959 No alias clade D phosphatase 0.04 OrthoFinder output from all 47 species
LOC_Os03g55320.1 LOC_Os03g55320 clade D phosphatase 0.03 OrthoFinder output from all 47 species
Lfl_g06622 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08161 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431182g0010 No alias Probable protein phosphatase 2C 78 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_10436977g0040 No alias clade D phosphatase 0.04 OrthoFinder output from all 47 species
Mp7g10100.1 No alias clade D phosphatase 0.03 OrthoFinder output from all 47 species
Msp_g00601 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16622 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0534.g027473 No alias clade D phosphatase & original description: CDS=1-795 0.03 OrthoFinder output from all 47 species
Solyc06g065920.4.1 Solyc06g065920 clade D phosphatase 0.03 OrthoFinder output from all 47 species
Spa_g29569 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0004970 ionotropic glutamate receptor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005230 extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0008066 glutamate receptor activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0022824 transmitter-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022835 transmitter-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0030594 neurotransmitter receptor activity IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 57 307
No external refs found!