Aliases : emb2184
Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL31 component
Gene families : OG0005954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005954_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01009748001 | |
| Cluster | HCCA: Cluster_13 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Als_g09129 | emb2184 | component *(bL31c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g39319 | emb2184 | component *(bL31c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0288.g063251 | emb2184 | component *(bL31c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g00101 | emb2184 | component *(bL31c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g09395 | emb2184 | component *(bL31c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g22510 | emb2184 | component *(bL31c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g22754 | emb2184 | component *(bL31c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g44210.1 | emb2184, LOC_Os01g44210 | component psRPL31 of large ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g27173 | emb2184 | component *(bL31c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g28539 | emb2184 | component *(bL31c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g46806 | No alias | component *(bL31c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g46807 | No alias | component *(bL31c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g080630.4.1 | emb2184, Solyc04g080630 | component psRPL31 of large ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| MF | GO:0004602 | glutathione peroxidase activity | IEP | HCCA |
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| MF | GO:0016209 | antioxidant activity | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0034357 | photosynthetic membrane | IEP | HCCA |
| CC | GO:0042651 | thylakoid membrane | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002150 | Ribosomal_L31 | 38 | 102 |
| No external refs found! |
