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  5. GSVIVT01009760001

GSVIVT01009760001


Description : Bifunctional nuclease 2 OS=Arabidopsis thaliana


Gene families : OG0001063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009760001

Target Alias Description ECC score Gene Family Method Actions
AT1G19660 No alias Wound-responsive family protein 0.07 OrthoFinder output from all 47 species
AT1G75380 BBD1, ATBBD1 bifunctional nuclease in basal defense response 1 0.06 OrthoFinder output from all 47 species
Adi_g059475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075725 BBD1, ATBBD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07082 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01537 BBD1, ATBBD1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g09926 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G019300.1 BBD1, ATBBD1,... not classified & original description: pacid=50586572... 0.04 OrthoFinder output from all 47 species
Ceric.22G026600.1 Ceric.22G026600 not classified & original description: pacid=50614244... 0.03 OrthoFinder output from all 47 species
Cre16.g688302 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g10487 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g11831 BBD1, ATBBD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g50622.1 LOC_Os01g50622 Bifunctional nuclease 1 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
LOC_Os08g26870.1 LOC_Os08g26870 Bifunctional nuclease 2 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Len_g59697 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12413 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15651 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02503 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06002 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05101 BBD1, ATBBD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10402 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g083310.3.1 Solyc02g083310 Bifunctional nuclease 2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Solyc04g080700.4.1 Solyc04g080700 Bifunctional nuclease 2 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e018013_P001 Zm00001e018013 Bifunctional nuclease 1 OS=Oryza sativa subsp. indica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003729 Bi_nuclease_dom 166 280
No external refs found!