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  5. GSVIVT01009889001

GSVIVT01009889001


Description : HVA22-like protein i OS=Arabidopsis thaliana


Gene families : OG0000762 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000762_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009889001

Target Alias Description ECC score Gene Family Method Actions
Aop_g38302 HVA22J not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0030.g024333 No alias not classified & original description: CDS=115-1131 0.02 OrthoFinder output from all 47 species
Azfi_s0030.g024337 No alias not classified & original description: CDS=1-1800 0.04 OrthoFinder output from all 47 species
Cba_g16927 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37365 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26071 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g14610.1 LOC_Os03g14610 Putative HVA22-like protein g OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_12086g0010 No alias HVA22-like protein i OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pir_g24840 HVA22J not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23612 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g01501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g46777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001050_P001 Zm00001e001050 HVA22-like protein i OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004345 TB2_DP1_HVA22 19 97
No external refs found!