GSVIVT01010522001 (SPL13, SPL13A)

Aliases : SPL13, SPL13A

Description : RNA biosynthesis.transcriptional activation.SBP transcription factor

Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01010522001

Target	Alias	Description	ECC score	Gene Family Method
Cba_g06624	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g26615	SPL2	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g34343	AtSPL9, SPL9	SBP-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
GSVIVT01033519001	AtSPL9, SPL9	RNA biosynthesis.transcriptional activation.SBP...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	91	164

External Links

No external refs found!