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  5. GSVIVT01010961001

GSVIVT01010961001 (MGP)


Aliases : MGP

Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01010961001
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00204520 IDD2, AtIDD2,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AMTR_s00059p00106830 IDD2, AtIDD2,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 OrthoFinder output from all 47 species
AT1G03840 MGP C2H2 and C2HC zinc fingers superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G02070 IDD5, AtIDD5 indeterminate(ID)-domain 5 0.02 OrthoFinder output from all 47 species
AT3G13810 IDD11, AtIDD11 indeterminate(ID)-domain 11 0.02 OrthoFinder output from all 47 species
AT3G50700 IDD2, AtIDD2 indeterminate(ID)-domain 2 0.01 OrthoFinder output from all 47 species
AT5G44160 NUC C2H2-like zinc finger protein 0.05 OrthoFinder output from all 47 species
Adi_g020457 MGP C2H2 subclass IDD transcription factor & original... 0.06 OrthoFinder output from all 47 species
Adi_g068284 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g068647 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069013 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g080135 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g108004 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g21518 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene21463.t1 IDD2, AtIDD2,... C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene23688.t1 MGP, Aspi01Gene23688 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene34058.t1 IDD16, AtIDD16,... C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene69376.t1 IDD2, AtIDD2,... C2H2 subclass IDD transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.01G010300.1 IDD16, AtIDD16,... C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.33G056300.1 IDD2, AtIDD2,... C2H2 subclass IDD transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dcu_g16536 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g02965 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01019000001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
GSVIVT01025658001 JKD RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
Gb_41434 IDD14, AtIDD14 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os01g09850.1 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os01g39110.1 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os01g70870.1 IDD2, AtIDD2,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os03g10140.1 LOC_Os03g10140 C2H2 zinc finger transcription factor. elicitor peptide... 0.03 OrthoFinder output from all 47 species
LOC_Os03g13400.1 IDD16, AtIDD16,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os04g47860.2 AtIDD12, IDD12,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os09g27650.2 IDD14, AtIDD14,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os09g38340.1 IDD5, AtIDD5,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Len_g16369 AtIDD12, IDD12 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Len_g47088 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430013g0020 MGP C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
MA_26413g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g07810 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Nbi_g03822 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g16325 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g17643 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g36454 JKD C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g38471 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g50860 IDD4, AtIDD4 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g65810 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g20764 MGP C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pnu_g28092 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ppi_g07601 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009246 JKD C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020376 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Smo117908 MGP RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
Solyc01g005060.3.1 IDD14, AtIDD14,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc03g098070.3.1 IDD14, AtIDD14,... C2H2 zinc finger transcription factor 0.06 OrthoFinder output from all 47 species
Solyc04g008500.4.1 IDD4, AtIDD4,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc06g062670.3.1 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc06g072360.3.1 IDD14, AtIDD14,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Solyc07g053570.4.1 MGP, Solyc07g053570 C2H2 zinc finger transcription factor 0.07 OrthoFinder output from all 47 species
Solyc09g007550.3.1 JKD, Solyc09g007550 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc11g069240.2.1 Solyc11g069240 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Spa_g18118 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e000780_P001 Zm00001e000780 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e004751_P001 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.07 OrthoFinder output from all 47 species
Zm00001e026143_P001 MGP, Zm00001e026143 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 6 28
No external refs found!