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  5. GSVIVT01011041001

GSVIVT01011041001


Description : LEC14B protein OS=Lithospermum erythrorhizon


Gene families : OG0004819 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004819_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011041001

Target Alias Description ECC score Gene Family Method Actions
Aev_g06060 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.23G046900.1 Ceric.23G046900 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021035.8 No alias LEC14B protein OS=Lithospermum erythrorhizon 0.01 OrthoFinder output from all 47 species
Cre05.g234500 No alias LEC14B protein OS=Lithospermum erythrorhizon 0.02 OrthoFinder output from all 47 species
Sam_g15302 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sam_g36994 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Solyc01g080690.3.1 Solyc01g080690 LEC14B homolog OS=Prunus armeniaca... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005779 obsolete integral component of peroxisomal membrane IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 185 222
IPR001680 WD40_repeat 142 176
IPR001680 WD40_repeat 106 133
IPR001680 WD40_repeat 261 304
IPR001680 WD40_repeat 310 345
No external refs found!