1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01011109001

GSVIVT01011109001


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011109001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00087300 LRL2,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Adi_g058340 LRL3 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g074330 LRL1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19174 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21524 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20728 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G024600.1 PIL5, PIF1,... bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g06439 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Dcu_g17517 HEC3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g19533 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Dde_g00562 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51490 LRL3 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g03638 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g58830.1 LOC_Os03g58830 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Len_g11076 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38961 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Msp_g13402 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17173 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g23158 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34682 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Solyc01g010130.4.1 Solyc01g010130 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc05g010610.3.1 Solyc05g010610 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc06g083170.3.1 Solyc06g083170 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Spa_g24532 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51940 LRL3 bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e012110_P003 Zm00001e012110 transcription factor (bHLH). transcriptional regulator (CIB) 0.05 OrthoFinder output from all 47 species
Zm00001e016160_P003 SPT, Zm00001e016160 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 271 318
No external refs found!