Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NSA2 maturation factor
Gene families : OG0003771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003771_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01011153001 | |
| Cluster | HCCA: Cluster_30 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00030p00185140 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g013709 | No alias | LSU processome maturation factor *(NSA2) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g14418 | No alias | LSU processome maturation factor *(NSA2) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g25334 | No alias | LSU processome maturation factor *(NSA2) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000944.38 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.01 | OrthoFinder output from all 47 species | |
| Gb_20609 | No alias | NSA2 LSU processome maturation factor | 0.02 | OrthoFinder output from all 47 species | |
| Len_g01146 | No alias | LSU processome maturation factor *(NSA2) & original... | 0.02 | OrthoFinder output from all 47 species | |
| MA_11189g0010 | No alias | NSA2 LSU processome maturation factor | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g01445 | No alias | LSU processome maturation factor *(NSA2) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g13277 | No alias | LSU processome maturation factor *(NSA2) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g07122 | No alias | LSU processome maturation factor *(NSA2) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Smo402189 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e010952_P001 | Zm00001e010952 | NSA2 LSU processome maturation factor | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e035832_P001 | Zm00001e035832 | NSA2 LSU processome maturation factor | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001510 | RNA methylation | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0016556 | mRNA modification | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| BP | GO:0080009 | mRNA methylation | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022309 | Ribosomal_S8e/biogenesis_NSA2 | 52 | 279 |
| No external refs found! |
