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  5. GSVIVT01011541001

GSVIVT01011541001


Description : 4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011541001
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00141400 evm_27.TU.AmTr_v1... 4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Als_g11897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26811 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17436 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g27234 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34196.t1 OPCL1, Aspi01Gene34196 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45697.t1 OPCL1, Aspi01Gene45697 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0258.g060636 No alias not classified & original description: CDS=1-1698 0.04 OrthoFinder output from all 47 species
Ceric.11G077600.1 Ceric.11G077600 not classified & original description: pacid=50595629... 0.03 OrthoFinder output from all 47 species
Ceric.18G030000.1 Ceric.18G030000 not classified & original description: pacid=50622017... 0.04 OrthoFinder output from all 47 species
Dac_g12985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01385 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10907 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g17286 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001827001 No alias 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_18693 OPCL1 OPC-8:CoA synthetase 0.08 OrthoFinder output from all 47 species
Len_g38035 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01742 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g09089 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09388 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04839 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23419 OPCL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g07522 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g42518 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g42148 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g65418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12256 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17540 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10312 OPCL1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g17956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56807 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo268211 OPCL1 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Spa_g11322 OPCL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g46255 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000264_P001 OPCL1, Zm00001e000264 OPC-8:CoA synthetase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 67 472
IPR025110 AMP-bd_C 482 556
No external refs found!