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  5. GSVIVT01011624001

GSVIVT01011624001


Description : Binding partner of ACD11 1 OS=Arabidopsis thaliana


Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011624001
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Adi_g088992 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115931 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g16560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14819 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19115 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03086 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009796 No alias not classified & original description: CDS=86-811 0.03 OrthoFinder output from all 47 species
Azfi_s0130.g049026 No alias not classified & original description: CDS=251-1009 0.04 OrthoFinder output from all 47 species
Ceric.05G062300.1 Ceric.05G062300 not classified & original description: pacid=50578128... 0.03 OrthoFinder output from all 47 species
Dac_g13809 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07449 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g09629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19804 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
LOC_Os03g50560.1 LOC_Os03g50560 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os04g53330.2 LOC_Os04g53330 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g54870.1 LOC_Os04g54870 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g55926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03642 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g07946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc06g072770.3.1 Solyc06g072770 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc08g076530.3.1 Solyc08g076530 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc10g076890.3.1 Solyc10g076890 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Tin_g05834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005469_P003 Zm00001e005469 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Zm00001e012039_P002 Zm00001e012039 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e024575_P001 Zm00001e024575 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e036683_P001 Zm00001e036683 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 35 95
No external refs found!