GSVIVT01012561001

Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL35 component

Gene families : OG0006536 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006536_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01012561001

Target	Alias	Description	ECC score	Gene Family Method
Adi_g032989	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.01	OrthoFinder output from all 47 species
Als_g18654	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Aop_g18112	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.01	OrthoFinder output from all 47 species
Ceric.15G044500.1	Ceric.15G044500	component *(bL35c) of large plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Dcu_g43056	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.01	OrthoFinder output from all 47 species
Dde_g06179	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.01	OrthoFinder output from all 47 species
Ehy_g03085	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.01	OrthoFinder output from all 47 species
Gb_16123	No alias	component psRPL35 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
LOC_Os06g43900.1	LOC_Os06g43900	component psRPL35 of large ribosomal subunit proteome	0.01	OrthoFinder output from all 47 species
Len_g34881	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Pnu_g04836	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.01	OrthoFinder output from all 47 species
Ppi_g18684	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014110	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.01	OrthoFinder output from all 47 species
Sam_g19900	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.01	OrthoFinder output from all 47 species
Solyc07g006000.3.1	Solyc07g006000	component psRPL35 of large ribosomal subunit proteome	0.01	OrthoFinder output from all 47 species
Spa_g24771	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Tin_g30198	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Zm00001e037448_P001	Zm00001e037448	component psRPL35 of large ribosomal subunit proteome	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	IEA	Interproscan
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR021137	Ribosomal_L35	1	55

External Links

No external refs found!

GSVIVT01012561001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation