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  5. GSVIVT01012574001

GSVIVT01012574001


Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL35 component


Gene families : OG0006536 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006536_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012574001
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AT2G24090 No alias Ribosomal protein L35 0.06 OrthoFinder output from all 47 species
Adi_g032989 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ala_g09316 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Als_g18654 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aop_g18112 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ceric.15G044500.1 Ceric.15G044500 component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Cre04.g217932 No alias Protein biosynthesis.organelle translation... 0.07 OrthoFinder output from all 47 species
Dcu_g43056 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Ehy_g03085 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Gb_16123 No alias component psRPL35 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
LOC_Os06g43900.1 LOC_Os06g43900 component psRPL35 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Len_g09835 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
MA_181338g0010 No alias component psRPL35 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Mp5g05850.1 No alias component psRPL35 of large ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Msp_g20481 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ore_g08410 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Pir_g14080 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Pp3c22_13420V3.1 Pp3c22_13420 Ribosomal protein L35 0.05 OrthoFinder output from all 47 species
Ppi_g18684 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014110 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Solyc07g006000.3.1 Solyc07g006000 component psRPL35 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Spa_g24771 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Zm00001e037448_P001 Zm00001e037448 component psRPL35 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR021137 Ribosomal_L35 1 55
No external refs found!