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  5. GSVIVT01012691001

GSVIVT01012691001


Description : Probable F-box protein At4g22030 OS=Arabidopsis thaliana


Gene families : OG0001367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001367_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012691001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00037390 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00044p00128270 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00044p00128640 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00044p00129060 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT4G04480 No alias unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:... 0.03 OrthoFinder output from all 47 species
Aev_g16127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g15216 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g39319 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene20983.t1 Aspi01Gene20983 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34562.t1 Aspi01Gene34562 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34564.t1 Aspi01Gene34564 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34568.t1 Aspi01Gene34568 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0334.g065488 No alias not classified & original description: CDS=1-2136 0.03 OrthoFinder output from all 47 species
Azfi_s0334.g065497 No alias not classified & original description: CDS=1-1488 0.06 OrthoFinder output from all 47 species
Cba_g13201 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G060100.1 Ceric.17G060100 not classified & original description: pacid=50617754... 0.02 OrthoFinder output from all 47 species
Ceric.17G060400.1 Ceric.17G060400 not classified & original description: pacid=50617546... 0.03 OrthoFinder output from all 47 species
Ceric.1Z099700.1 Ceric.1Z099700 not classified & original description: pacid=50573460... 0.03 OrthoFinder output from all 47 species
Ceric.1Z159800.1 Ceric.1Z159800 not classified & original description: pacid=50567680... 0.04 OrthoFinder output from all 47 species
Ceric.1Z159900.1 Ceric.1Z159900 not classified & original description: pacid=50567683... 0.04 OrthoFinder output from all 47 species
Ceric.1Z166800.1 Ceric.1Z166800 not classified & original description: pacid=50632888... 0.04 OrthoFinder output from all 47 species
Ceric.1Z166900.1 Ceric.1Z166900 not classified & original description: pacid=50632887... 0.04 OrthoFinder output from all 47 species
Ceric.1Z228600.1 Ceric.1Z228600 not classified & original description: pacid=50606299... 0.03 OrthoFinder output from all 47 species
Ceric.1Z240500.1 Ceric.1Z240500 not classified & original description: pacid=50576892... 0.05 OrthoFinder output from all 47 species
Dac_g26357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g45269 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g18822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g30200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037681001 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os02g13190.1 LOC_Os02g13190 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp5g00930.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp5g01090.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp5g01100.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Mp5g17910.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Ore_g17653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g080830.1.1 Solyc02g080830 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc02g080840.1.1 Solyc02g080840 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Zm00001e024925_P001 Zm00001e024925 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR027949 Chloroplast_duf 93 146
No external refs found!