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  5. GSVIVT01013048001

GSVIVT01013048001


No description available


Gene families : OG0000255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013048001
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00023650 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00013p00055400 evm_27.TU.AmTr_v1... No description available 0.1 OrthoFinder output from all 47 species
AMTR_s00057p00136560 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G05230 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 OrthoFinder output from all 47 species
AT2G05250 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 OrthoFinder output from all 47 species
AT2G35540 No alias DNAJ heat shock N-terminal domain-containing protein 0.04 OrthoFinder output from all 47 species
Adi_g079764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g02654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G032100.1 Ceric.13G032100 not classified & original description: pacid=50635670... 0.03 OrthoFinder output from all 47 species
Ceric.26G037400.1 Ceric.26G037400 not classified & original description: pacid=50598993... 0.03 OrthoFinder output from all 47 species
Dac_g07351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g30620.3 LOC_Os02g30620 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g27113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03986 No alias chaperone component *(SDJ) of SUVH-SDJ methylation... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001665 No alias not classified & original description: CDS=1-2265 0.03 OrthoFinder output from all 47 species
Smo122991 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc07g047690.1.1 Solyc07g047690 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g005300.3.1 Solyc08g005300 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Spa_g43751 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008360_P001 Zm00001e008360 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e036676_P001 Zm00001e036676 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR024593 DUF3444 170 377
No external refs found!