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  5. GSVIVT01013204001

GSVIVT01013204001 (SUA)


Aliases : SUA

Description : SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana


Gene families : OG0002445 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002445_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013204001
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00089100 SUA,... SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
AT3G54230 SUA suppressor of abi3-5 0.09 OrthoFinder output from all 47 species
Adi_g014405 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g018709 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058381 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g105523 SUA not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g24331 SUA not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g06676 SUA not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g37096 SUA not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g20905 SUA not classified & original description: none 0.09 OrthoFinder output from all 47 species
Als_g22735 SUA not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g19169 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04658 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21507.t1 SUA, Aspi01Gene21507 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34127.t1 SUA, Aspi01Gene34127 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34129.t1 SUA, Aspi01Gene34129 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0129.g048912 SUA not classified & original description: CDS=110-3388 0.04 OrthoFinder output from all 47 species
Cba_g31749 SUA not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.01G030500.1 SUA, Ceric.01G030500 not classified & original description: pacid=50592465... 0.1 OrthoFinder output from all 47 species
Ceric.22G052600.1 SUA, Ceric.22G052600 not classified & original description: pacid=50613886... 0.13 OrthoFinder output from all 47 species
Dac_g28893 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g14899 SUA not classified & original description: none 0.13 OrthoFinder output from all 47 species
Dcu_g39059 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20662 SUA not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_28214 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g07070.1 SUA, LOC_Os02g07070 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
Len_g07229 SUA not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g55563 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g08592 SUA not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g29782 SUA not classified & original description: none 0.09 OrthoFinder output from all 47 species
MA_10091679g0010 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_188532g0010 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Mp1g04870.1 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Nbi_g09118 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g07127 SUA not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g10790 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g16565 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g20001 SUA not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g06928 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g49398 SUA not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g16370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38762 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Smo402018 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Smo407112 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Solyc08g077310.3.1 SUA, Solyc08g077310 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
Spa_g07600 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13781 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g15554 SUA not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e033409_P006 SUA, Zm00001e033409 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 292 349
IPR000504 RRM_dom 454 520
IPR000467 G_patch_dom 954 995
No external refs found!