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  5. GSVIVT01014104001

GSVIVT01014104001 (TBL38)


Aliases : TBL38

Description : Protein trichome birefringence-like 38 OS=Arabidopsis thaliana


Gene families : OG0000038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014104001
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00135110 TBL3,... Protein trichome birefringence-like 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00021p00123440 TBL31,... Protein trichome birefringence-like 31 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00034050 TBL34,... Protein trichome birefringence-like 34 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00045p00169080 TBL6,... Protein trichome birefringence-like 6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00114p00046060 TBL36,... Protein trichome birefringence-like 36 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT2G30010 TBL45 TRICHOME BIREFRINGENCE-LIKE 45 0.05 OrthoFinder output from all 47 species
AT2G34070 TBL37 TRICHOME BIREFRINGENCE-LIKE 37 0.03 OrthoFinder output from all 47 species
Aev_g09209 TBL18 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g11788 TBL25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04395 TBL25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G032300.1 TBL25, Ceric.27G032300 not classified & original description: pacid=50605050... 0.05 OrthoFinder output from all 47 species
Ceric.31G004600.1 TBL23, Ceric.31G004600 mannan O-acetyltransferase *(MOAT) & original... 0.02 OrthoFinder output from all 47 species
Dac_g23885 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g33785 TBL5 polysaccharide O-acetyltransferase *(TBR) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01033900001 TBL8 Protein trichome birefringence-like 8 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_34157 TBL1 xylan O-acetyltransferase (XOAT) 0.02 OrthoFinder output from all 47 species
LOC_Os01g46400.1 TBL19, LOC_Os01g46400 Protein trichome birefringence-like 19 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g00589 TBL25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g11124 TBL25 mannan O-acetyltransferase *(MOAT) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03254 TBL10 rhamnogalacturonan-I O-acetyltransferase *(TBL) &... 0.03 OrthoFinder output from all 47 species
Lfl_g08016 TBL26 mannan O-acetyltransferase *(MOAT) & original description: none 0.02 OrthoFinder output from all 47 species
MA_189329g0010 TBL36 xylan O-acetyltransferase (XOAT) 0.03 OrthoFinder output from all 47 species
MA_245850g0010 TBL24 mannan O-acetyltransferase (MOAT) 0.03 OrthoFinder output from all 47 species
Pir_g17696 TBL25 mannan O-acetyltransferase *(MOAT) & original description: none 0.09 OrthoFinder output from all 47 species
Ppi_g16905 TBL21 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g07588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12879 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22562 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29703 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g095610.4.1 TBL25, Solyc01g095610 Protein trichome birefringence-like 25 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc05g052440.2.1 TBL33, Solyc05g052440 xylan O-acetyltransferase (XOAT) 0.03 OrthoFinder output from all 47 species
Solyc05g052540.2.1 ESK1, TBL29,... xylan O-acetyltransferase (XOAT) 0.05 OrthoFinder output from all 47 species
Solyc10g008030.4.1 TBL39, Solyc10g008030 Protein trichome birefringence-like 38 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g01134 TBL23 mannan O-acetyltransferase *(MOAT) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e009759_P001 TBL27, Zm00001e009759 xyloglucan O-acetyltransferase (AXY4) 0.02 OrthoFinder output from all 47 species
Zm00001e030698_P002 TBL38, Zm00001e030698 Protein trichome birefringence-like 38 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR025846 TBL_N 42 93
IPR025846 TBL_N 1222 1274
IPR001584 Integrase_cat-core 862 985
IPR025724 GAG-pre-integrase_dom 771 847
IPR026057 PC-Esterase 1275 1352
IPR026057 PC-Esterase 95 335
No external refs found!