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  5. GSVIVT01014155001

GSVIVT01014155001


Description : Disease resistance protein At4g27190 OS=Arabidopsis thaliana


Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014155001
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00183610 evm_27.TU.AmTr_v1... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G61310 No alias LRR and NB-ARC domains-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
Aev_g06771 RPS5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017017001 No alias Probable disease resistance protein At5g63020... 0.04 OrthoFinder output from all 47 species
GSVIVT01017023001 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01017136001 No alias Probable disease resistance protein At1g61190... 0.04 OrthoFinder output from all 47 species
GSVIVT01017143001 RPS5 Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01034250001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01034252001 No alias Probable disease resistance protein At1g61300... 0.03 OrthoFinder output from all 47 species
GSVIVT01038386001 RPS5 Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01038446001 No alias Probable disease resistance protein At1g52660... 0.03 OrthoFinder output from all 47 species
Gb_12859 No alias Probable disease resistance protein At4g27220... 0.04 OrthoFinder output from all 47 species
LOC_Os11g36410.1 RPS5, LOC_Os11g36410 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10428204g0010 No alias Probable disease resistance protein At5g63020... 0.03 OrthoFinder output from all 47 species
MA_13844g0010 RPS5 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_178357g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_48202g0010 No alias Probable disease resistance protein At5g63020... 0.03 OrthoFinder output from all 47 species
MA_502346g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_5551624g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8348g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_91465g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pir_g33523 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g48677 RPS5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo110652 No alias Probable disease resistance protein At1g61310... 0.03 OrthoFinder output from all 47 species
Solyc02g036270.4.1 Solyc02g036270 Probable disease resistance protein At4g27220... 0.03 OrthoFinder output from all 47 species
Zm00001e019557_P001 Zm00001e019557 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 1 177
No external refs found!