1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01014244001

GSVIVT01014244001 (GLR2.8, ATGLR2.8)


Aliases : GLR2.8, ATGLR2.8

Description : Solute transport.channels.GLR ligand-gated cation channel


Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014244001
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00182440 GLR2.8,... Solute transport.channels.GLR ligand-gated cation channel 0.05 OrthoFinder output from all 47 species
AMTR_s00019p00182630 GLR2.7,... Solute transport.channels.GLR ligand-gated cation channel 0.05 OrthoFinder output from all 47 species
AT2G24710 GLR2.3, ATGLR2.3 glutamate receptor 2.3 0.05 OrthoFinder output from all 47 species
AT2G24720 GLR2.2, ATGLR2.2 glutamate receptor 2.2 0.03 OrthoFinder output from all 47 species
AT2G29100 ATGLR2.9, GLR2.9 glutamate receptor 2.9 0.08 OrthoFinder output from all 47 species
AT2G29110 GLR2.8, ATGLR2.8 glutamate receptor 2.8 0.03 OrthoFinder output from all 47 species
AT2G29120 GLR2.7, ATGLR2.7 glutamate receptor 2.7 0.06 OrthoFinder output from all 47 species
AT3G04110 ATGLR1.1, GLR1.1, GLR1 glutamate receptor 1.1 0.03 OrthoFinder output from all 47 species
AT3G07520 GLR1.4, ATGLR1.4 glutamate receptor 1.4 0.04 OrthoFinder output from all 47 species
AT5G11180 ATGLR2.6, GLR2.6 glutamate receptor 2.6 0.05 OrthoFinder output from all 47 species
AT5G11210 GLR2.5, ATGLR2.5 glutamate receptor 2.5 0.04 OrthoFinder output from all 47 species
AT5G48400 ATGLR1.2, GLR1.2 Glutamate receptor family protein 0.04 OrthoFinder output from all 47 species
AT5G48410 ATGLR1.3, GLR1.3 glutamate receptor 1.3 0.03 OrthoFinder output from all 47 species
Adi_g002041 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43000 GLR3.6, ATGLR3.6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20599 GLUR3, GLR3.4, ATGLR3.4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g27035 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.35G032300.1 GLR3.3,... ligand-gated cation channel *(GLR) & original... 0.04 OrthoFinder output from all 47 species
Ceric.35G032400.1 ATGLR3.1, GLR2,... ligand-gated cation channel *(GLR) & original... 0.03 OrthoFinder output from all 47 species
Dac_g39922 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22997 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38984 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01021159001 GLR2.7, ATGLR2.7 Solute transport.channels.GLR ligand-gated cation channel 0.04 OrthoFinder output from all 47 species
GSVIVT01029195001 GLR2.2, ATGLR2.2 Solute transport.channels.GLR ligand-gated cation channel 0.08 OrthoFinder output from all 47 species
GSVIVT01029198001 GLR2.8, ATGLR2.8 Solute transport.channels.GLR ligand-gated cation channel 0.04 OrthoFinder output from all 47 species
GSVIVT01030602001 GLUR3, GLR3.4, ATGLR3.4 Solute transport.channels.GLR ligand-gated cation channel 0.05 OrthoFinder output from all 47 species
GSVIVT01033142001 GLR2.8, ATGLR2.8 Solute transport.channels.GLR ligand-gated cation channel 0.04 OrthoFinder output from all 47 species
GSVIVT01033150001 GLR2.7, ATGLR2.7 Solute transport.channels.GLR ligand-gated cation channel 0.04 OrthoFinder output from all 47 species
Gb_09070 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
Gb_20613 GLR3.3, ATGLR3.3 ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
Gb_27767 GLR3.3, ATGLR3.3 ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
Gb_28362 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
Gb_28364 ATGLR3.2,... ligand-gated cation channel (GLR) 0.07 OrthoFinder output from all 47 species
Gb_39754 GLR3.3, ATGLR3.3 ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
LOC_Os02g54640.1 ATGLR2.9,... ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
LOC_Os06g08930.1 GLR2.8,... ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
Len_g10645 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g39997 ATGLR3.1, GLR2,... ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g46456 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29844 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10427025g0010 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
MA_10430853g0010 GLR3.3, ATGLR3.3 ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
MA_10434521g0010 GLR2.1, ATGLR2.1 ligand-gated cation channel (GLR) 0.08 OrthoFinder output from all 47 species
MA_6222576g0010 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel (GLR) 0.06 OrthoFinder output from all 47 species
MA_958834g0010 ATGLR3.2,... ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
Ppi_g25923 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g44319 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005895 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original... 0.02 OrthoFinder output from all 47 species
Sam_g16302 No alias ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g077290.2.1 ATGLR2.9,... ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
Solyc06g063170.3.1 GLR2.8,... ligand-gated cation channel (GLR) 0.09 OrthoFinder output from all 47 species
Solyc06g063180.3.1 GLR2.8,... ligand-gated cation channel (GLR) 0.05 OrthoFinder output from all 47 species
Solyc06g063190.3.1 GLR2.8,... ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
Solyc06g063200.2.1 GLR2.8,... ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
Solyc06g063210.3.1 GLR2.8,... ligand-gated cation channel (GLR) 0.09 OrthoFinder output from all 47 species
Solyc08g006500.4.1 GLR2.8,... ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
Spa_g54501 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e013021_P001 GLUR3, GLR3.4,... ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
Zm00001e013023_P001 ATGLR3.5, GLR6,... ligand-gated cation channel (GLR) 0.05 OrthoFinder output from all 47 species
Zm00001e023728_P001 GLR2.8,... ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004970 ionotropic glutamate receptor activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 614 929
IPR001828 ANF_lig-bd_rcpt 301 541
IPR001828 ANF_lig-bd_rcpt 2 167
IPR001320 Iontro_rcpt_C 930 966
No external refs found!