1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01014595001

GSVIVT01014595001


Description : Disease resistance protein At4g27190 OS=Arabidopsis thaliana


Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014595001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00238210 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g14610... 0.01 OrthoFinder output from all 47 species
AMTR_s00009p00245910 RPS2,... Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00088510 evm_27.TU.AmTr_v1... No description available 0.11 OrthoFinder output from all 47 species
AMTR_s00050p00210650 evm_27.TU.AmTr_v1... Putative disease resistance protein At1g63350... 0.09 OrthoFinder output from all 47 species
AMTR_s00062p00146080 RPS2,... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00071p00163290 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g27220... 0.02 OrthoFinder output from all 47 species
AMTR_s00071p00163330 evm_27.TU.AmTr_v1... Probable disease resistance protein At5g63020... 0.03 OrthoFinder output from all 47 species
AMTR_s00078p00177570 RPS2,... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AMTR_s00101p00133980 RFL1,... Disease resistance protein RFL1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AMTR_s00121p00125720 evm_27.TU.AmTr_v1... Probable disease resistance protein At1g61180... 0.01 OrthoFinder output from all 47 species
AMTR_s00142p00041790 RPS2,... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G12210 RFL1 RPS5-like 1 0.03 OrthoFinder output from all 47 species
AT1G12220 RPS5 Disease resistance protein (CC-NBS-LRR class) family 0.05 OrthoFinder output from all 47 species
AT1G12280 No alias LRR and NB-ARC domains-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT1G12290 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G51480 No alias Disease resistance protein (CC-NBS-LRR class) family 0.01 OrthoFinder output from all 47 species
AT1G61190 No alias LRR and NB-ARC domains-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT1G61310 No alias LRR and NB-ARC domains-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT1G63350 No alias Disease resistance protein (CC-NBS-LRR class) family 0.01 OrthoFinder output from all 47 species
AT5G43730 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT5G43740 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT5G47260 No alias ATP binding;GTP binding;nucleotide... 0.02 OrthoFinder output from all 47 species
AT5G63020 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
Aob_g32394 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01017142001 RPS5 Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01017232001 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01038391001 No alias Probable disease resistance protein At1g12290... 0.04 OrthoFinder output from all 47 species
Gb_12853 RPS2 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_12854 RPS2 Disease resistance protein SUMM2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_16713 RPS2 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_26475 RPS5 Putative disease resistance protein RGA3 OS=Solanum... 0.04 OrthoFinder output from all 47 species
LOC_Os01g57870.1 RPS2, LOC_Os01g57870 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
LOC_Os01g58530.1 RFL1, LOC_Os01g58530 Disease resistance protein SUMM2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g72680.1 RPS5, LOC_Os01g72680 Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g10900.1 RPS2, LOC_Os03g10900 Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os09g14010.1 RPS2, LOC_Os09g14010 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os11g36410.1 RPS5, LOC_Os11g36410 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc08g005500.4.1 Solyc08g005500 Putative late blight resistance protein homolog R1A-6... 0.05 OrthoFinder output from all 47 species
Solyc08g007250.3.1 Solyc08g007250 Disease resistance protein At4g27190 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc10g076440.1.1 Solyc10g076440 Disease resistance protein At4g27190 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 507 564
IPR001611 Leu-rich_rpt 440 495
IPR002182 NB-ARC 61 298
No external refs found!