GSVIVT01014852001 (ATCLC-F, CLCF, CLC-F)

Aliases : ATCLC-F, CLCF, CLC-F

Description : Solute transport.carrier-mediated transport.CLC anion channel / anion:proton antiporter

Gene families : OG0002475 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002475_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01014852001

Target	Alias	Description	ECC score	Gene Family Method
Ala_g13328	ATCLC-F, CLCF, CLC-F	anion channel / anion:proton antiporter *(CLC) &...	0.04	OrthoFinder output from all 47 species
Als_g15238	ATCLC-F, CLCF, CLC-F	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Azfi_s0116.g046439	ATCLC-F, CLCF, CLC-F	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Dac_g01762	ATCLC-F, CLCF, CLC-F	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Dcu_g01935	ATCLC-F, CLCF, CLC-F	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Len_g27823	ATCLC-F, CLCF, CLC-F	anion channel / anion:proton antiporter *(CLC) &...	0.04	OrthoFinder output from all 47 species
Lfl_g02271	ATCLC-F, CLCF, CLC-F	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Msp_g13573	ATCLC-F, CLCF, CLC-F	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Nbi_g03127	ATCLC-F, CLCF, CLC-F	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Ore_g04532	ATCLC-F, CLCF, CLC-F	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0194.g025413	ATCLC-F, CLCF, CLC-F	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Sam_g38753	No alias	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Zm00001e015677_P001	ATCLC-F, CLCF,...	anion channel / anion:proton antiporter (CLC)	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005244	voltage-gated monoatomic ion channel activity	None	Extended
MF	GO:0005247	voltage-gated chloride channel activity	IEA	Interproscan
MF	GO:0005253	monoatomic anion channel activity	None	Extended
MF	GO:0005254	chloride channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006820	monoatomic anion transport	None	Extended
BP	GO:0006821	chloride transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008308	voltage-gated monoatomic anion channel activity	None	Extended
MF	GO:0008509	monoatomic anion transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015103	inorganic anion transmembrane transporter activity	None	Extended
MF	GO:0015108	chloride transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022832	voltage-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	HCCA
MF	GO:0004619	phosphoglycerate mutase activity	IEP	HCCA
MF	GO:0004743	pyruvate kinase activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
BP	GO:0006007	glucose catabolic process	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
BP	GO:0019320	hexose catabolic process	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
MF	GO:0030145	manganese ion binding	IEP	HCCA
MF	GO:0030955	potassium ion binding	IEP	HCCA
MF	GO:0031420	alkali metal ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0044282	small molecule catabolic process	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046365	monosaccharide catabolic process	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA
MF	GO:0070569	uridylyltransferase activity	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000644	CBS_dom	671	704
IPR000644	CBS_dom	579	634
IPR001807	Cl-channel_volt-gated	180	509

External Links

No external refs found!

GSVIVT01014852001 (ATCLC-F, CLCF, CLC-F)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation