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  5. GSVIVT01015203001

GSVIVT01015203001 (BGAL1)


Aliases : BGAL1

Description : Cell wall.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase


Gene families : OG0000377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000377_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015203001
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00054p00149030 BGAL6, MUM2,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 OrthoFinder output from all 47 species
AMTR_s00138p00054750 BGAL13,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
AT3G13750 BGAL1 beta galactosidase 1 0.07 OrthoFinder output from all 47 species
AT5G56870 BGAL4 beta-galactosidase 4 0.07 OrthoFinder output from all 47 species
Ala_g09149 BGAL8 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23795 BGAL9 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09977 BGAL8 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27419 BGAL8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015038001 BGAL7 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.06 OrthoFinder output from all 47 species
Gb_32359 BGAL8 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Gb_39826 BGAL8 Beta-galactosidase 6 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Gb_39827 BGAL8 Beta-galactosidase 8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10436863g0010 BGAL10 Beta-galactosidase 3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_14774g0010 BGAL8 beta-galactosidase (BGAL) 0.05 OrthoFinder output from all 47 species
MA_329922g0010 BGAL8 beta-galactosidase (BGAL) 0.05 OrthoFinder output from all 47 species
MA_55965g0010 BGAL8 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Msp_g24966 BGAL1 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013679_P001 BGAL13, Zm00001e013679 Beta-galactosidase 12 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e018433_P002 BGAL9, Zm00001e018433 beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006848 pyruvate transport IEP HCCA
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015718 monocarboxylic acid transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:1901475 pyruvate transmembrane transport IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000922 Lectin_gal-bd_dom 755 832
IPR031330 Gly_Hdrlase_35_cat 29 334
No external refs found!