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  5. GSVIVT01015258001

GSVIVT01015258001 (SNF7.2, VPS32)


Aliases : SNF7.2, VPS32

Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.VPS32/SNF7 component


Gene families : OG0001125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015258001
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AT4G29160 SNF7.1 SNF7 family protein 0.04 OrthoFinder output from all 47 species
Adi_g109174 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Aev_g09146 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Ala_g16766 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0018.g014906 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.05 OrthoFinder output from all 47 species
Ceric.18G015000.1 SNF7.2, VPS32,... component *(VPS32/SNF7) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.32G014400.1 SNF7.1, Ceric.32G014400 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.04 OrthoFinder output from all 47 species
Cre06.g282200 SNF7.2, VPS32 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder output from all 47 species
LOC_Os09g09480.2 SNF7.2, VPS32,... component VPS32/SNF7 of ESCRT-III complex 0.03 OrthoFinder output from all 47 species
Len_g00301 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Len_g03128 SNF7.1 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
MA_10435786g0010 SNF7.2, VPS32 component VPS32/SNF7 of ESCRT-III complex 0.02 OrthoFinder output from all 47 species
Mp6g10770.1 SNF7.2, VPS32 component VPS32/SNF7 of ESCRT-III complex 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024369 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Solyc05g026050.4.1 SNF7.2, VPS32,... component VPS32/SNF7 of ESCRT-III complex 0.04 OrthoFinder output from all 47 species
Solyc08g065900.4.1 SNF7.2, VPS32,... component VPS32/SNF7 of ESCRT-III complex 0.07 OrthoFinder output from all 47 species
Zm00001e024016_P002 SNF7.1, Zm00001e024016 component VPS32/SNF7 of ESCRT-III complex 0.04 OrthoFinder output from all 47 species
Zm00001e037444_P001 SNF7.2, VPS32,... component VPS32/SNF7 of ESCRT-III complex 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 20 186
No external refs found!