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  5. GSVIVT01015571001

GSVIVT01015571001 (WSIP2, TPR4)


Aliases : WSIP2, TPR4

Description : RNA biosynthesis.transcriptional repression.TPL/TPR transcriptional co-repressor


Gene families : OG0000427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000427_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015571001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00142040 TPR2,... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 OrthoFinder output from all 47 species
AMTR_s00048p00159380 TPL, WSIP1,... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 OrthoFinder output from all 47 species
AMTR_s00051p00079490 TPR1,... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.06 OrthoFinder output from all 47 species
AT1G15750 TPL, WSIP1 Transducin family protein / WD-40 repeat family protein 0.05 OrthoFinder output from all 47 species
AT3G15880 WSIP2, TPR4 WUS-interacting protein 2 0.03 OrthoFinder output from all 47 species
AT3G16830 TPR2 TOPLESS-related 2 0.04 OrthoFinder output from all 47 species
Adi_g012443 TPL, WSIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056043 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Adi_g117102 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Aev_g05875 TPL, WSIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06729 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Ala_g18277 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.05 OrthoFinder output from all 47 species
Als_g27970 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0207.g057893 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Ceric.07G013800.1 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g07917 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Gb_32130 TPL, WSIP1 transcriptional repressor (TPL). transcriptional... 0.04 OrthoFinder output from all 47 species
Gb_37153 TPL, WSIP1 transcriptional repressor (TPL). transcriptional... 0.03 OrthoFinder output from all 47 species
Lfl_g40403 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g03198 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Ore_g04998 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Ore_g17223 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g13544 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004827 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019559 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020365 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Sam_g16347 No alias transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Solyc01g100050.3.1 TPR3, Solyc01g100050 transcriptional repressor (TPL). transcriptional... 0.04 OrthoFinder output from all 47 species
Spa_g17156 TPR1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Tin_g06694 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e001080_P001 TPR1, Zm00001e001080 transcriptional repressor (TPL). transcriptional... 0.06 OrthoFinder output from all 47 species
Zm00001e038558_P003 TPR1, Zm00001e038558 transcriptional repressor (TPL). transcriptional... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 920 954
IPR001680 WD40_repeat 459 492
No external refs found!