Aliases : MUR4, UXE1, HSR8
Description : Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-arabinose synthesis.UDP-D-xylose 4-epimerase
Gene families : OG0000465 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000465_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01015720001 | |
| Cluster | HCCA: Cluster_2 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g017545 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0302.g063753 | MUR4, UXE1, HSR8 | EC_5.1 racemase or epimerase & original description: CDS=930-1343 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g04584 | MUR4, UXE1, HSR8 | EC_5.1 racemase or epimerase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g29614 | MUR4, UXE1, HSR8 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.02G030800.1 | UGE5, Ceric.02G030800 | EC_5.1 racemase or epimerase & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Cre04.g214502 | UGE5 | Carbohydrate metabolism.nucleotide sugar... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g16034 | MUR4, UXE1, HSR8 | EC_5.1 racemase or epimerase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g04735 | No alias | EC_5.1 racemase or epimerase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0002.g001039 | UGE5 | EC_5.1 racemase or epimerase & original description: CDS=1-1365 | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g04491 | UGE5 | EC_5.1 racemase or epimerase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g00852 | MUR4, UXE1, HSR8 | EC_5.1 racemase or epimerase & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004819 | glutamine-tRNA ligase activity | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006425 | glutaminyl-tRNA aminoacylation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR016040 | NAD(P)-bd_dom | 74 | 389 |
| No external refs found! |
