1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01016305001

GSVIVT01016305001


Description : Tetraspanin-5 OS=Arabidopsis thaliana


Gene families : OG0000199 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000199_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016305001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00197500 evm_27.TU.AmTr_v1... Protein TORNADO 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00108p00058320 evm_27.TU.AmTr_v1... Tetraspanin-6 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT3G12090 TET6 tetraspanin6 0.05 OrthoFinder output from all 47 species
AT4G30430 TET9 tetraspanin9 0.03 OrthoFinder output from all 47 species
Ala_g12513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49368 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Aob_g08764 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Aob_g24023 TET8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06721.t1 TET8, Aspi01Gene06721 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Aspi01Gene06730.t1 TET8, Aspi01Gene06730 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Aspi01Gene06731.t1 TET8, Aspi01Gene06731 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Aspi01Gene06739.t1 TET8, Aspi01Gene06739 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Aspi01Gene49096.t1 TET2, Aspi01Gene49096 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0037.g025901 TET8 not classified & original description: CDS=1-795 0.02 OrthoFinder output from all 47 species
Ehy_g04494 TET1, TRN2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g14453 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.05 OrthoFinder output from all 47 species
Ehy_g14703 TET7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_00679 TET8 Tetraspanin-8 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Gb_26509 TET1, TRN2 Protein TORNADO 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os02g12750.1 TET2, LOC_Os02g12750 Tetraspanin-2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os05g03530.1 TET6, LOC_Os05g03530 Tetraspanin-6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Msp_g40394 TET8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g01963 TET2 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Pnu_g07223 TET8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21629 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g059390.3.1 TET2, Solyc03g059390 Tetraspanin-2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc04g049080.4.1 TET6, Solyc04g049080 Tetraspanin-5 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Spa_g09332 TET2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004417_P001 TET10, Zm00001e004417 Tetraspanin-10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e028243_P001 TET6, Zm00001e028243 Tetraspanin-6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e029484_P001 TET6, Zm00001e029484 Tetraspanin-6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e030929_P001 TET8, Zm00001e030929 Tetraspanin-8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 2 164
No external refs found!