1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01016372001

GSVIVT01016372001 (LAC4, IRX12, ATLMCO4, LMCO4)


Aliases : LAC4, IRX12, ATLMCO4, LMCO4

Description : Cell wall.lignin.monolignol conjugation and polymerization.lignin laccase


Gene families : OG0000044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016372001
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00061860 ATLAC17, LAC17,... Cell wall.lignin.monolignol conjugation and... 0.04 OrthoFinder output from all 47 species
AMTR_s00012p00061910 ATLAC17, LAC17,... Cell wall.lignin.monolignol conjugation and... 0.04 OrthoFinder output from all 47 species
AMTR_s00023p00051360 LAC12,... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.03 OrthoFinder output from all 47 species
AMTR_s00045p00045490 evm_27.TU.AmTr_v1... Cell wall.lignin.monolignol conjugation and... 0.04 OrthoFinder output from all 47 species
AT2G29130 ATLAC2, LAC2 laccase 2 0.04 OrthoFinder output from all 47 species
AT2G30210 LAC3 laccase 3 0.02 OrthoFinder output from all 47 species
AT2G38080 LAC4, IRX12,... Laccase/Diphenol oxidase family protein 0.05 OrthoFinder output from all 47 species
AT2G40370 LAC5 laccase 5 0.02 OrthoFinder output from all 47 species
AT5G01190 LAC10 laccase 10 0.05 OrthoFinder output from all 47 species
AT5G05390 LAC12 laccase 12 0.05 OrthoFinder output from all 47 species
AT5G07130 LAC13 laccase 13 0.04 OrthoFinder output from all 47 species
AT5G58910 LAC16 laccase 16 0.03 OrthoFinder output from all 47 species
AT5G60020 ATLAC17, LAC17 laccase 17 0.05 OrthoFinder output from all 47 species
Adi_g075486 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Adi_g084947 LAC3 EC_1.10 oxidoreductase acting on diphenol or related... 0.07 OrthoFinder output from all 47 species
Aev_g38935 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Aev_g40076 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Ala_g11904 ATLAC2, LAC2 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ala_g37335 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Als_g28840 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aob_g11475 LAC12 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Aob_g21183 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aob_g26968 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aob_g32664 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Aop_g11077 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Aop_g11078 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aop_g17511 LAC6 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Aop_g19600 ATLAC2, LAC2 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aop_g69868 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aspi01Gene11313.t1 LAC11, Aspi01Gene11313 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Aspi01Gene11316.t1 LAC11, Aspi01Gene11316 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Aspi01Gene12021.t1 ATLAC17, LAC17,... EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Aspi01Gene27504.t1 ATLAC17, LAC17,... EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Aspi01Gene44103.t1 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Aspi01Gene62271.t1 Aspi01Gene62271 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011368 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Azfi_s0037.g025913 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Ceric.06G043600.1 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ceric.08G009700.1 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.05 OrthoFinder output from all 47 species
Ceric.09G068500.1 Ceric.09G068500 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ceric.1Z032500.1 ATLAC17, LAC17,... EC_1.10 oxidoreductase acting on diphenol or related... 0.05 OrthoFinder output from all 47 species
Ceric.1Z151100.1 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ceric.32G074100.1 LAC11, Ceric.32G074100 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Dac_g03861 LAC1, ATLAC1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05536 ATLAC2, LAC2 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Dac_g20746 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Dcu_g01442 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Dcu_g01525 LAC6 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Dcu_g13513 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Dcu_g16653 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Dcu_g37912 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Dcu_g45123 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Dde_g46244 LAC6 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ehy_g09523 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ehy_g28519 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
GSVIVT01001603001 LAC14 Laccase-14 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01012335001 LAC14 Laccase-14 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01012359001 TT10, LAC15, ATLAC15 Laccase-15 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01034817001 LAC14 Laccase-15 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01037479001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.08 OrthoFinder output from all 47 species
Gb_00462 ATLAC17, LAC17 lignin laccase 0.03 OrthoFinder output from all 47 species
Gb_05992 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.04 OrthoFinder output from all 47 species
Gb_11065 LAC11 Laccase-11 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_14613 ATLAC17, LAC17 lignin laccase 0.03 OrthoFinder output from all 47 species
Gb_33400 LAC12 Laccase-3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Gb_34469 LAC12 Laccase-12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g16610.1 ATLAC17, LAC17,... lignin laccase 0.03 OrthoFinder output from all 47 species
LOC_Os03g18640.1 LAC5, LOC_Os03g18640 Laccase-5 OS=Arabidopsis thaliana (sp|q9siy8|lac5_arath... 0.03 OrthoFinder output from all 47 species
LOC_Os05g38420.1 ATLAC17, LAC17,... lignin laccase 0.02 OrthoFinder output from all 47 species
LOC_Os10g20610.1 LAC7, LOC_Os10g20610 Laccase-15 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
LOC_Os11g42200.1 LAC7, LOC_Os11g42200 Laccase-19 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os11g42220.1 LAC7, LOC_Os11g42220 Laccase-20 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Lfl_g08085 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Lfl_g22058 ATLAC2, LAC2 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
MA_10431084g0010 ATLAC17, LAC17 Laccase-17 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10433259g0010 LAC11 Laccase-2 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_115430g0010 ATLAC17, LAC17 Laccase-17 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_118833g0010 ATLAC17, LAC17 lignin laccase 0.02 OrthoFinder output from all 47 species
MA_126229g0010 No alias L-ascorbate oxidase OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
MA_126229g0020 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.03 OrthoFinder output from all 47 species
MA_14240g0010 ATLAC17, LAC17 Laccase-4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_205016g0010 ATLAC17, LAC17 Laccase-4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_28768g0010 LAC4, IRX12,... Laccase-4 OS=Arabidopsis thaliana (sp|o80434|lac4_arath... 0.02 OrthoFinder output from all 47 species
MA_33057g0010 LAC11 lignin laccase 0.03 OrthoFinder output from all 47 species
MA_460753g0010 LAC3 Laccase-3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_488981g0010 LAC3 Laccase-13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_57140g0020 LAC12 Laccase-12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_5717063g0010 ATLAC17, LAC17 Laccase-4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_66348g0010 LAC12 Laccase-12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_7461249g0010 LAC11 Laccase-11 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_785232g0010 ATLAC17, LAC17 Laccase-4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_9337419g0010 ATLAC2, LAC2 Laccase-22 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp3g20310.1 LAC11 Laccase-2 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Msp_g06778 ATLAC2, LAC2 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Msp_g08559 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Msp_g30721 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Msp_g31169 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Msp_g32623 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Msp_g35947 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Msp_g39536 ATLAC2, LAC2 EC_1.10 oxidoreductase acting on diphenol or related... 0.05 OrthoFinder output from all 47 species
Nbi_g04868 LAC3 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Nbi_g26479 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Nbi_g38937 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Ore_g23776 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ore_g29002 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Pir_g13534 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Pnu_g28314 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Pp3c3_3800V3.1 Pp3c3_3800 Plant L-ascorbate oxidase 0.01 OrthoFinder output from all 47 species
Pp3c6_3290V3.1 ATLAC2, LAC2, Pp3c6_3290 laccase 2 0.02 OrthoFinder output from all 47 species
Ppi_g23638 LAC3 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Ppi_g24696 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Ppi_g27818 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ppi_g59159 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Ppi_g60706 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Solyc01g008830.2.1 Solyc01g008830 Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.04 OrthoFinder output from all 47 species
Solyc02g062650.3.1 LAC11, Solyc02g062650 Laccase-11 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc02g062660.2.1 LAC11, Solyc02g062660 Laccase-11 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc02g085110.4.1 LAC11, Solyc02g085110 Laccase-11 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Solyc02g085120.3.1 LAC11, Solyc02g085120 Laccase-11 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc05g043360.3.1 LAC7, Solyc05g043360 Laccase-7 OS=Arabidopsis thaliana (sp|q9sr40|lac7_arath... 0.02 OrthoFinder output from all 47 species
Solyc05g050540.4.1 LAC6, Solyc05g050540 Laccase-6 OS=Arabidopsis thaliana (sp|q9zpy2|lac6_arath... 0.02 OrthoFinder output from all 47 species
Solyc05g052340.4.1 LAC12, Solyc05g052340 Laccase-5 OS=Arabidopsis thaliana (sp|q9siy8|lac5_arath... 0.08 OrthoFinder output from all 47 species
Solyc05g052400.3.1 LAC12, Solyc05g052400 Laccase-12 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc06g048860.3.1 LAC5, Solyc06g048860 Laccase-5 OS=Arabidopsis thaliana (sp|q9siy8|lac5_arath... 0.04 OrthoFinder output from all 47 species
Solyc06g050530.3.1 LAC5, Solyc06g050530 Laccase-12 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc06g076330.3.1 ATLAC2, LAC2,... lignin laccase 0.07 OrthoFinder output from all 47 species
Solyc09g010990.3.1 ATLAC17, LAC17,... lignin laccase 0.06 OrthoFinder output from all 47 species
Solyc09g011960.2.1 ATLAC17, LAC17,... lignin laccase 0.05 OrthoFinder output from all 47 species
Solyc09g014240.4.1 LAC4, IRX12,... lignin laccase 0.07 OrthoFinder output from all 47 species
Solyc09g150105.1.1 ATLAC17, LAC17,... lignin laccase 0.05 OrthoFinder output from all 47 species
Solyc10g076830.2.1 LAC4, IRX12,... lignin laccase 0.07 OrthoFinder output from all 47 species
Spa_g21407 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Spa_g41071 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Spa_g46784 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Spa_g47262 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.05 OrthoFinder output from all 47 species
Spa_g52089 LAC6 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Tin_g04091 LAC11 EC_1.10 oxidoreductase acTing on diphenol or related... 0.02 OrthoFinder output from all 47 species
Tin_g06886 LAC11 EC_1.10 oxidoreductase acTing on diphenol or related... 0.03 OrthoFinder output from all 47 species
Tin_g40230 ATLAC17, LAC17 EC_1.10 oxidoreductase acTing on diphenol or related... 0.04 OrthoFinder output from all 47 species
Zm00001e001354_P001 LAC5, Zm00001e001354 Laccase-3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e011332_P001 LAC7, Zm00001e011332 Laccase-15 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e019303_P001 ATLAC2, LAC2,... lignin laccase 0.02 OrthoFinder output from all 47 species
Zm00001e019412_P001 LAC12, Zm00001e019412 Laccase-3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e023953_P001 LAC12, Zm00001e023953 Laccase-23 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e028830_P002 LAC12, Zm00001e028830 Laccase-3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e031826_P001 ATLAC17, LAC17,... lignin laccase 0.04 OrthoFinder output from all 47 species
Zm00001e032635_P001 LAC7, Zm00001e032635 Laccase-14 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e033959_P001 Zm00001e033959 Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.02 OrthoFinder output from all 47 species
Zm00001e037263_P001 Zm00001e037263 Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR011706 Cu-oxidase_C 399 516
IPR001117 Cu-oxidase_2nd 135 284
IPR011707 Cu-oxidase_N 11 122
No external refs found!