1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01016405001

GSVIVT01016405001


No description available


Gene families : OG0000041 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016405001
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Aev_g15154 HSP17.6A,... class-C-II small heat-shock-responsive protein &... 0.03 OrthoFinder output from all 47 species
Ala_g18124 ATHSP17.4, HSP17.4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g53050 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g53345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14682.t1 HSP17.6II,... class-C-II small heat-shock-responsive protein &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene17167.t1 HSP18.2, Aspi01Gene17167 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18770.t1 HSP18.2, Aspi01Gene18770 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48477.t1 Aspi01Gene48477 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58654.t1 Aspi01Gene58654 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71599.t1 HSP17.6A,... class-C-II small heat-shock-responsive protein &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene71606.t1 HSP17.6II,... class-C-II small heat-shock-responsive protein &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene71608.t1 HSP17.6II,... class-C-II small heat-shock-responsive protein &... 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g008067 ATHSP17.4, HSP17.4 not classified & original description: CDS=1-531 0.02 OrthoFinder output from all 47 species
Ceric.05G086800.1 Ceric.05G086800 not classified & original description: pacid=50577531... 0.03 OrthoFinder output from all 47 species
Ceric.17G067700.1 ATHSP17.4,... not classified & original description: pacid=50618365... 0.02 OrthoFinder output from all 47 species
Ceric.1Z206800.1 ATHSP17.4,... not classified & original description: pacid=50618928... 0.04 OrthoFinder output from all 47 species
Ceric.1Z206900.1 HSP18.2, Ceric.1Z206900 not classified & original description: pacid=50618927... 0.04 OrthoFinder output from all 47 species
Ceric.36G025900.1 HSP18.2, Ceric.36G025900 not classified & original description: pacid=50568453... 0.02 OrthoFinder output from all 47 species
Dcu_g13242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_01049 HSP17.6II class-C-II small heat-shock-responsive protein 0.03 OrthoFinder output from all 47 species
LOC_Os01g04340.1 HSP18.2, LOC_Os01g04340 16.6 kDa heat shock protein OS=Oryza sativa subsp.... 0.06 OrthoFinder output from all 47 species
LOC_Os01g04370.1 HSP18.2, LOC_Os01g04370 class-C-I small heat-shock-responsive protein 0.06 OrthoFinder output from all 47 species
LOC_Os01g04380.1 HSP18.2, LOC_Os01g04380 class-C-I small heat-shock-responsive protein 0.07 OrthoFinder output from all 47 species
LOC_Os01g08860.1 HSP17.6II, LOC_Os01g08860 class-C-II small heat-shock-responsive protein 0.07 OrthoFinder output from all 47 species
LOC_Os03g15960.1 ATHSP17.4,... class-C-I small heat-shock-responsive protein 0.05 OrthoFinder output from all 47 species
LOC_Os04g36750.1 ATHSP22.0, LOC_Os04g36750 class-ER small heat-shock-responsive protein 0.07 OrthoFinder output from all 47 species
LOC_Os11g13980.1 ATHSP22.0, LOC_Os11g13980 21.9 kDa heat shock protein OS=Oryza sativa subsp.... 0.06 OrthoFinder output from all 47 species
Len_g58803 HSP18.2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_143029g0010 No alias 17.5 kDa class I heat shock protein OS=Glycine max... 0.02 OrthoFinder output from all 47 species
MA_154769g0010 No alias 17.5 kDa class I heat shock protein OS=Glycine max... 0.02 OrthoFinder output from all 47 species
Msp_g28204 HSP18.2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g21029 No alias class-PX small heat-shock-responsive protein & original... 0.04 OrthoFinder output from all 47 species
Pnu_g31347 ATHSP17.4, HSP17.4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g24404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g44292 HSP18.2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g072250.4.1 Solyc04g072250 17.5 kDa class I heat shock protein OS=Glycine max... 0.07 OrthoFinder output from all 47 species
Solyc10g086680.1.1 Solyc10g086680 18.2 kDa class I heat shock protein OS=Medicago sativa... 0.02 OrthoFinder output from all 47 species
Spa_g39469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44736 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 43 82
No external refs found!