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  5. GSVIVT01016859001

GSVIVT01016859001 (HSP60-3A)


Aliases : HSP60-3A

Description : External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein


Gene families : OG0001609 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001609_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016859001
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00241820 HSP60, HSP60-3B,... External stimuli response.temperature.Hsp... 0.07 OrthoFinder output from all 47 species
AT2G33210 HSP60-2 heat shock protein 60-2 0.17 OrthoFinder output from all 47 species
AT3G13860 HSP60-3A heat shock protein 60-3A 0.06 OrthoFinder output from all 47 species
Adi_g007058 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g011946 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020511 HSP60, HSP60-3B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078675 HSP60, HSP60-3B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02162 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14272 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01781 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30058 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0104.g044833 HSP60, HSP60-3B chaperone *(Hsp60) & original description: CDS=368-2095 0.05 OrthoFinder output from all 47 species
Cba_g03933 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.05G060200.1 HSP60, HSP60-3B,... chaperone *(Hsp60) & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.20G020600.1 HSP60, HSP60-3B,... chaperone *(Hsp60) & original description:... 0.12 OrthoFinder output from all 47 species
Ceric.25G075100.1 HSP60, HSP60-3B,... chaperone *(Hsp60) & original description:... 0.09 OrthoFinder output from all 47 species
Cre06.g309100 HSP60, HSP60-3B External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Dcu_g10198 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g47313 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g07028 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05977 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21749 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_35390 HSP60, HSP60-3B chaperone (Hsp60) 0.06 OrthoFinder output from all 47 species
Gb_37654 HSP60, HSP60-3B chaperone (Hsp60) 0.09 OrthoFinder output from all 47 species
LOC_Os05g46290.1 HSP60-3A, LOC_Os05g46290 chaperone (Hsp60) 0.14 OrthoFinder output from all 47 species
LOC_Os10g32550.1 HSP60, HSP60-3B,... chaperone (Hsp60) 0.02 OrthoFinder output from all 47 species
Len_g02840 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g12398 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.06 OrthoFinder output from all 47 species
MA_10436324g0010 HSP60, HSP60-3B chaperone (Hsp60) 0.08 OrthoFinder output from all 47 species
MA_8569886g0010 HSP60, HSP60-3B Chaperonin CPN60, mitochondrial OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Msp_g11889 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g47850 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01176 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g00600 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g27554 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06294 No alias chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g06295 No alias chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10342 No alias chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10343 No alias chaperone *(Hsp60) & original description: none 0.09 OrthoFinder output from all 47 species
Solyc03g121640.3.1 HSP60-3A, Solyc03g121640 chaperone (Hsp60) 0.11 OrthoFinder output from all 47 species
Solyc05g053470.3.1 HSP60, HSP60-3B,... chaperone (Hsp60) 0.12 OrthoFinder output from all 47 species
Spa_g08282 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g18561 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g06599 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e004641_P001 HSP60, HSP60-3B,... chaperone (Hsp60) 0.03 OrthoFinder output from all 47 species
Zm00001e032273_P004 HSP60-3A, Zm00001e032273 chaperone (Hsp60) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 42 545
No external refs found!