GSVIVT01017163001


Description : Photosynthesis.photorespiration.glycerate kinase


Gene families : OG0005429 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005429_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017163001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00077720 evm_27.TU.AmTr_v1... Photosynthesis.photorespiration.glycerate kinase 0.07 OrthoFinder output from all 47 species
Aev_g30719 No alias glycerate kinase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07216 No alias glycerate kinase & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g04099 No alias glycerate kinase & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g00563 No alias glycerate kinase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31572.t1 Aspi01Gene31572 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene31576.t1 Aspi01Gene31576 glycerate kinase & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0237.g059581 No alias glycerate kinase & original description: CDS=1-1128 0.03 OrthoFinder output from all 47 species
Cba_g05152 No alias glycerate kinase & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.07G068000.1 Ceric.07G068000 glycerate kinase & original description: pacid=50626920... 0.12 OrthoFinder output from all 47 species
Dac_g15173 No alias glycerate kinase & original description: none 0.11 OrthoFinder output from all 47 species
Dcu_g14931 No alias glycerate kinase & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g09398 No alias glycerate kinase & original description: none 0.08 OrthoFinder output from all 47 species
LOC_Os01g48990.1 LOC_Os01g48990 glycerate kinase 0.1 OrthoFinder output from all 47 species
Len_g12798 No alias glycerate kinase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g01333 No alias glycerate kinase & original description: none 0.09 OrthoFinder output from all 47 species
MA_9944g0020 No alias glycerate kinase 0.07 OrthoFinder output from all 47 species
Mp5g22480.1 No alias glycerate kinase 0.09 OrthoFinder output from all 47 species
Msp_g10061 No alias glycerate kinase & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g02077 No alias glycerate kinase & original description: none 0.11 OrthoFinder output from all 47 species
Pir_g08624 No alias glycerate kinase & original description: none 0.1 OrthoFinder output from all 47 species
Ppi_g12331 No alias glycerate kinase & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g08572 No alias glycerate kinase & original description: none 0.07 OrthoFinder output from all 47 species
Smo97903 No alias Photosynthesis.photorespiration.glycerate kinase 0.08 OrthoFinder output from all 47 species
Solyc03g120430.3.1 Solyc03g120430 glycerate kinase 0.2 OrthoFinder output from all 47 species
Spa_g05982 No alias glycerate kinase & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g00953 No alias glycerate kinase & original description: none 0.1 OrthoFinder output from all 47 species
Zm00001e029691_P004 Zm00001e029691 glycerate kinase 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!