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  5. GSVIVT01017222001

GSVIVT01017222001 (ATSUG1, RPT6A)


Aliases : ATSUG1, RPT6A

Description : Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT6 regulatory component


Gene families : OG0004338 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004338_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017222001

Target Alias Description ECC score Gene Family Method Actions
Aev_g07060 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000792.28 ATSUG1, RPT6A Protein degradation.26S proteasome.regulatory... 0.04 OrthoFinder output from all 47 species
Cre04.g216600 ATSUG1, RPT6A Protein degradation.26S proteasome.regulatory... 0.08 OrthoFinder output from all 47 species
Pir_g01586 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Solyc05g018590.3.1 ATSUG1, RPT6A,... regulatory component RPT6 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Zm00001e014515_P001 ATSUG1, RPT6A,... regulatory component RPT6 of 26S proteasome 0.08 OrthoFinder output from all 47 species
Zm00001e024980_P001 ATSUG1, RPT6A,... regulatory component RPT6 of 26S proteasome 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR032501 Prot_ATP_ID_OB_C 83 138
IPR003959 ATPase_AAA_core 196 329
No external refs found!