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  5. GSVIVT01017774001

GSVIVT01017774001


Description : RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017774001

Target Alias Description ECC score Gene Family Method Actions
AT5G16540 ZFN3 zinc finger nuclease 3 0.03 OrthoFinder output from all 47 species
Adi_g017416 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Adi_g075179 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Adi_g075180 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aev_g10552 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Aev_g11036 ZFN1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Als_g59230 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aop_g01684 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aop_g38684 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0013.g013277 ZFN1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Ceric.20G050900.1 Ceric.20G050900 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Dac_g46062 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ehy_g07764 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ehy_g14501 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Mp2g10620.1 No alias C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Msp_g06264 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Nbi_g18764 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Ore_g03222 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ppi_g12708 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Sam_g21674 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Solyc06g054620.4.1 Solyc06g054620 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g21682 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Spa_g37336 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 353 376
IPR000571 Znf_CCCH 143 168
IPR000571 Znf_CCCH 51 76
IPR000571 Znf_CCCH 98 122
IPR000571 Znf_CCCH 305 330
No external refs found!