Aliases : BAM9, BMY3
Description : Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.amylase activities.beta amylase
Gene families : OG0000477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000477_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01017808001 | |
| Cluster | HCCA: Cluster_14 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os10g41550.1 | BMY8, BAM3,... | beta amylase | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g03039 | BAM1, BMY7, TR-BAMY | EC_3.2 glycosylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g15518 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g077530.3.1 | BMY8, BAM3,... | beta amylase | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000272 | polysaccharide catabolic process | IEA | Interproscan |
| MF | GO:0016161 | beta-amylase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008134 | transcription factor binding | IEP | HCCA |
| MF | GO:0017025 | TBP-class protein binding | IEP | HCCA |
| BP | GO:0019725 | cellular homeostasis | IEP | HCCA |
| BP | GO:0042592 | homeostatic process | IEP | HCCA |
| BP | GO:0045454 | cell redox homeostasis | IEP | HCCA |
| MF | GO:0140296 | general transcription initiation factor binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001554 | Glyco_hydro_14 | 89 | 440 |
| No external refs found! |
