Aliases : ASL1, LBD36
Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor
Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00187850 | LBD2,... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00032p00142260 | LBD4,... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00076p00127530 | LBD4,... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G72980 | LBD7 | LOB domain-containing protein 7 | 0.04 | OrthoFinder output from all 47 species | |
| AT2G30340 | LBD13 | LOB domain-containing protein 13 | 0.03 | OrthoFinder output from all 47 species | |
| AT2G31310 | LBD14 | LOB domain-containing protein 14 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G50510 | LBD28 | LOB domain-containing protein 28 | 0.05 | OrthoFinder output from all 47 species | |
| AT4G00220 | LBD30, JLO | Lateral organ boundaries (LOB) domain family protein | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g00680 | AS2 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0225.g058902 | LBD4 | AS2/LOB-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g43172 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g46319 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01006269001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01010625001 | LBD23 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.13 | OrthoFinder output from all 47 species | |
| GSVIVT01024662001 | LBD12, ASL5, PCK1 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01029979001 | LBD20 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_10524 | LBD15, ASL11 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_16914 | LBD1 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_23688 | LBD15, ASL11 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_29853 | LBD4 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_39343 | LBD20 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g07270.1 | LBD15, ASL11,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g27980.1 | LBD12, ASL5,... | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g15972 | LOB | AS2/LOB-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_126761g0010 | LBD20 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| MA_290245g0010 | AS2 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| MA_41152g0010 | LBD4 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g28878 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g43401 | No alias | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g56591 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g27211 | AS2 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g42819 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g112430.1.1 | LOB, Solyc03g112430 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc05g048740.3.1 | LBD11, Solyc05g048740 | transcription factor (AS2/LOB) | 0.07 | OrthoFinder output from all 47 species | |
| Solyc06g050430.3.1 | LBD15, ASL11,... | transcription factor (AS2/LOB) | 0.07 | OrthoFinder output from all 47 species | |
| Solyc06g071660.3.1 | LOB, Solyc06g071660 | transcription factor (AS2/LOB) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc06g082310.3.1 | LBD12, ASL5,... | transcription factor (AS2/LOB) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc06g082430.2.1 | LBD15, ASL11,... | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g010810.1.1 | LBD2, Solyc12g010810 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e001031_P001 | LBD18, Zm00001e001031 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e031510_P001 | LBD12, ASL5,... | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e038582_P001 | LBD18, Zm00001e038582 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0010215 | cellulose microfibril organization | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| BP | GO:0016049 | cell growth | IEP | HCCA |
| BP | GO:0030198 | extracellular matrix organization | IEP | HCCA |
| CC | GO:0031225 | obsolete anchored component of membrane | IEP | HCCA |
| BP | GO:0040007 | growth | IEP | HCCA |
| BP | GO:0043062 | extracellular structure organization | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004883 | LOB | 7 | 103 |
| No external refs found! |
