GSVIVT01019034001


No description available


Gene families : OG0003430 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003430_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019034001
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00157160 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Als_g06219 No alias non-specific cation channel *(PQL1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.33G008100.1 Ceric.33G008100 non-specific cation channel *(PQL1) & original... 0.03 OrthoFinder output from all 47 species
Dde_g14386 No alias non-specific cation channel *(PQL1) & original description: none 0.03 OrthoFinder output from all 47 species
MA_171419g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0004970 ionotropic glutamate receptor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005230 extracellular ligand-gated monoatomic ion channel activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
MF GO:0008066 glutamate receptor activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0022824 transmitter-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022835 transmitter-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030594 neurotransmitter receptor activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR006603 PQ-loop_rpt 32 88
IPR006603 PQ-loop_rpt 268 325
No external refs found!