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  5. GSVIVT01019484001

GSVIVT01019484001 (UBC10)


Aliases : UBC10

Description : Protein degradation.peptide tagging.Membrane-anchored-Ubiquitin (MUB)-anchor addition.UBC-subclass-6 conjugation E2 protein


Gene families : OG0000200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019484001
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT2G16740 UBC29 ubiquitin-conjugating enzyme 29 0.03 OrthoFinder output from all 47 species
AT5G41700 ATUBC8, UBC8 ubiquitin conjugating enzyme 8 0.03 OrthoFinder output from all 47 species
AT5G53300 UBC10 ubiquitin-conjugating enzyme 10 0.06 OrthoFinder output from all 47 species
AT5G56150 UBC30 ubiquitin-conjugating enzyme 30 0.01 OrthoFinder output from all 47 species
Aev_g46322 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g30294 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32602 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06017 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23200 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05731 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06824 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g19798 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.23G049000.1 UBC9, Ceric.23G049000 E2 MUB ubiquitin-conjugating enzyme & original... 0.03 OrthoFinder output from all 47 species
Cre16.g693700 UBC10 Protein degradation.peptide... 0.01 OrthoFinder output from all 47 species
Dac_g04910 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00153 UBC30 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27645 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18731 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Len_g27675 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05219 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23404 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g31742 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.05 OrthoFinder output from all 47 species
MA_10433663g0010 UBC10 conjugation E2 protein 0.03 OrthoFinder output from all 47 species
MA_194g0030 ATUBC11, UBC11 conjugation E2 protein 0.04 OrthoFinder output from all 47 species
Mp5g21800.1 UBC10 conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Msp_g02640 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g17088 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38609 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g41767 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g02572 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0081.g018057 UBC10 E2 MUB ubiquitin-conjugating enzyme & original... 0.03 OrthoFinder output from all 47 species
Solyc06g007510.3.1 UBC10, Solyc06g007510 conjugation E2 protein 0.05 OrthoFinder output from all 47 species
Solyc08g008220.3.1 UBC10, Solyc08g008220 conjugation E2 protein 0.07 OrthoFinder output from all 47 species
Solyc08g081945.1.1 UBC10, Solyc08g081945 conjugation E2 protein 0.08 OrthoFinder output from all 47 species
Solyc12g056100.3.1 UBC9, Solyc12g056100 conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Spa_g01833 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05494 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g52701 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010614_P001 EMB144, CIN4,... E2 conjugating component COP10 of COP10-DET1 (CDD) subcomplex 0.03 OrthoFinder output from all 47 species
Zm00001e019454_P001 ATUBC11, UBC11,... conjugation E2 protein 0.02 OrthoFinder output from all 47 species
Zm00001e025244_P002 UBC28, Zm00001e025244 conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Zm00001e027303_P001 ATUBC11, UBC11,... conjugation E2 protein 0.02 OrthoFinder output from all 47 species
Zm00001e027992_P001 UBC9, Zm00001e027992 conjugation E2 protein 0.02 OrthoFinder output from all 47 species
Zm00001e033719_P001 UBC10, Zm00001e033719 conjugation E2 protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0030008 TRAPP complex IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!