GSVIVT01019562001


No description available


Gene families : OG0000162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019562001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00225580 evm_27.TU.AmTr_v1... Cytoskeleton.cp-actin-dependent plastid movement.THRUMIN... 0.03 OrthoFinder output from all 47 species
AT1G64500 No alias Glutaredoxin family protein 0.07 OrthoFinder output from all 47 species
Ala_g07760 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13283 No alias actin filament-bundling factor *(THRUMIN) & original... 0.06 OrthoFinder output from all 47 species
Ala_g22121 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15574 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14853 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Aop_g26067 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042605 No alias not classified & original description: CDS=1-1131 0.04 OrthoFinder output from all 47 species
Cba_g38411 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.03G069000.1 Ceric.03G069000 actin filament-bundling factor *(THRUMIN) & original... 0.08 OrthoFinder output from all 47 species
Ceric.07G055600.1 Ceric.07G055600 not classified & original description: pacid=50627902... 0.02 OrthoFinder output from all 47 species
Dac_g39355 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Dde_g18247 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Dde_g24691 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os01g13480.1 LOC_Os01g13480 actin filament-bundling factor (THRUMIN) 0.07 OrthoFinder output from all 47 species
LOC_Os07g46570.1 LOC_Os07g46570 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g28369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g10825 No alias actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Msp_g17483 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g29256 No alias actin filament-bundling factor *(THRUMIN) & original... 0.05 OrthoFinder output from all 47 species
Msp_g31514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04826 No alias actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g06898 No alias actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g21184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24105 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18365 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Ore_g29124 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14419 No alias actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Pp3c5_15250V3.1 Pp3c5_15250 Glutaredoxin family protein 0.02 OrthoFinder output from all 47 species
Ppi_g47065 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30402 No alias actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Smo116000 No alias Cytoskeleton.cp-actin-dependent plastid movement.THRUMIN... 0.02 OrthoFinder output from all 47 species
Solyc06g082180.3.1 Solyc06g082180 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc08g082590.3.1 Solyc08g082590 actin filament-bundling factor (THRUMIN) 0.1 OrthoFinder output from all 47 species
Solyc11g005270.1.1 Solyc11g005270 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g07070 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g07910 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Spa_g11995 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g21220 No alias acTin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e008195_P001 Zm00001e008195 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e016368_P001 Zm00001e016368 actin filament-bundling factor (THRUMIN) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!