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  5. GSVIVT01019797001

GSVIVT01019797001


No description available


Gene families : OG0000248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019797001
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00131590 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00016p00063620 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00085p00068720 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT3G13510 No alias Protein of Unknown Function (DUF239) 0.03 OrthoFinder output from all 47 species
AT4G23350 No alias Protein of Unknown Function (DUF239) 0.04 OrthoFinder output from all 47 species
AT4G23365 No alias No description available 0.03 OrthoFinder output from all 47 species
AT5G18460 No alias Protein of Unknown Function (DUF239) 0.02 OrthoFinder output from all 47 species
Als_g07752 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42673.t1 Aspi01Gene42673 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0109.g045324 No alias not classified & original description: CDS=108-1337 0.03 OrthoFinder output from all 47 species
Azfi_s0280.g062318 No alias not classified & original description: CDS=377-1795 0.03 OrthoFinder output from all 47 species
Cba_g73343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019916001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01026336001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01026932001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os02g55210.1 LOC_Os02g55210 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g16640.1 LOC_Os06g16640 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g28000.1 LOC_Os06g28000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g24050.1 LOC_Os07g24050 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g10920.1 LOC_Os11g10920 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g18140.1 LOC_Os11g18140 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g22015 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011724 No alias not classified & original description: CDS=841-2229 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019587 No alias not classified & original description: CDS=1-1074 0.02 OrthoFinder output from all 47 species
Smo415608 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo438522 No alias No description available 0.04 OrthoFinder output from all 47 species
Spa_g55599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g18816 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e037003_P001 Zm00001e037003 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0031012 extracellular matrix IEP HCCA
InterPro domains Description Start Stop
IPR025521 Neprosin_propep 33 124
IPR004314 Neprosin 160 211
IPR004314 Neprosin 215 348
No external refs found!