Description : RNA biosynthesis.transcriptional activation.LIM transcription factor
Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00259550 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.LIM... | 0.09 | OrthoFinder output from all 47 species | |
| AMTR_s00065p00168710 | WLIM1,... | RNA biosynthesis.transcriptional activation.LIM... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G01780 | No alias | GATA type zinc finger transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G10200 | WLIM1 | GATA type zinc finger transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G45800 | No alias | GATA type zinc finger transcription factor family protein | 0.09 | OrthoFinder output from all 47 species | |
| AT3G61230 | No alias | GATA type zinc finger transcription factor family protein | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g19801 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g11262 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g21791 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g01000 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g10165 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g12127 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g04896 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.07G010100.1 | Ceric.07G010100 | LIM-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g04473 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g13344 | No alias | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g30378 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g39812 | No alias | LIM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g04716 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g27988 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01007812001 | WLIM1 | RNA biosynthesis.transcriptional activation.LIM... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_11447 | WLIM1 | transcription factor (LIM) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g42820.1 | LOC_Os02g42820 | transcription factor (LIM) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os04g45010.1 | LOC_Os04g45010 | transcription factor (LIM) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os10g35930.1 | LOC_Os10g35930 | transcription factor (LIM) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os12g32620.1 | WLIM1, LOC_Os12g32620 | transcription factor (LIM) | 0.05 | OrthoFinder output from all 47 species | |
| Len_g22091 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g05819 | No alias | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g21255 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_824463g0010 | WLIM1 | transcription factor (LIM) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g03006 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g10239 | WLIM1 | LIM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g06617 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g08756 | WLIM1 | LIM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g16712 | WLIM1 | LIM-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g25515 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g36153 | No alias | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g04414 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g01788 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g094320.3.1 | Solyc01g094320 | transcription factor (LIM) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g007940.4.1 | Solyc08g007940 | transcription factor (LIM) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g080740.3.1 | Solyc08g080740 | transcription factor (LIM) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g017520.3.1 | Solyc10g017520 | transcription factor (LIM) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g044740.2.1 | WLIM1, Solyc11g044740 | transcription factor (LIM) | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g01071 | No alias | LIM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e007423_P001 | Zm00001e007423 | transcription factor (LIM) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015234_P001 | Zm00001e015234 | transcription factor (LIM) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e023098_P001 | Zm00001e023098 | transcription factor (LIM) | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e041310_P001 | Zm00001e041310 | transcription factor (LIM) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0003006 | developmental process involved in reproduction | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
| BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
| BP | GO:0007275 | multicellular organism development | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009790 | embryo development | IEP | HCCA |
| BP | GO:0009793 | embryo development ending in seed dormancy | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010215 | cellulose microfibril organization | IEP | HCCA |
| MF | GO:0015299 | obsolete solute:proton antiporter activity | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| BP | GO:0016049 | cell growth | IEP | HCCA |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| MF | GO:0016837 | carbon-oxygen lyase activity, acting on polysaccharides | IEP | HCCA |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
| BP | GO:0022414 | reproductive process | IEP | HCCA |
| BP | GO:0030198 | extracellular matrix organization | IEP | HCCA |
| MF | GO:0030570 | pectate lyase activity | IEP | HCCA |
| MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
| CC | GO:0031225 | obsolete anchored component of membrane | IEP | HCCA |
| BP | GO:0032501 | multicellular organismal process | IEP | HCCA |
| BP | GO:0032502 | developmental process | IEP | HCCA |
| BP | GO:0040007 | growth | IEP | HCCA |
| BP | GO:0042545 | cell wall modification | IEP | HCCA |
| BP | GO:0043062 | extracellular structure organization | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| BP | GO:0048856 | anatomical structure development | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
| No external refs found! |
