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  5. GSVIVT01019889001

GSVIVT01019889001 (ATEXP7, EXPA7, ATHEXP...)


Aliases : ATEXP7, EXPA7, ATHEXP ALPHA 1.26, ATEXPA7, EXP7

Description : Cell wall.cell wall proteins.expansins.alpha-type expansin


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019889001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00240270 ATEXPL2, EXPL2,... Cell wall.cell wall proteins.expansins.alpha-like-type expansin 0.03 OrthoFinder output from all 47 species
AMTR_s00002p00146900 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.02 OrthoFinder output from all 47 species
AMTR_s00072p00134750 EXPA8, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
AMTR_s00111p00059150 ATHEXP BETA 1.4,... Putative expansin-B2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00119p00058870 ATEXPA1, EXP1,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 OrthoFinder output from all 47 species
AMTR_s00168p00074090 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G26770 ATEXPA10,... expansin A10 0.05 OrthoFinder output from all 47 species
Aop_g00307 EXPB3, ATEXPB3,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene45675.t1 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g56176 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G040000.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.26G037600.1 ATEXPA3, EXP3,... alpha-class expansin & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g37896 EXP15, ATEXPA15,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01016525001 ATEXPA4, ATEXP4,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 OrthoFinder output from all 47 species
GSVIVT01025509001 ATEXPA10,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 OrthoFinder output from all 47 species
GSVIVT01028474001 ATEXPA25,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
GSVIVT01035233001 ATEXP13,... Expansin-A13 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_07437 No alias alpha-class expansin 0.03 OrthoFinder output from all 47 species
Gb_16008 EXP15, ATEXPA15,... alpha-class expansin 0.05 OrthoFinder output from all 47 species
Gb_29322 ATEXLA1, EXPL1,... alpha-like-class expansin 0.05 OrthoFinder output from all 47 species
Gb_29324 ATEXLA1, EXPL1,... alpha-like-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os01g14660.1 ATHEXP ALPHA... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os02g42650.1 EXPB3, ATEXPB3,... beta-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os02g44108.1 ATHEXP BETA 1.4,... Expansin-B11 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os03g06050.1 ATEXPA11, ATHEXP... alpha-class expansin 0.05 OrthoFinder output from all 47 species
LOC_Os03g31480.1 ATEXPA11, ATHEXP... alpha-class expansin 0.05 OrthoFinder output from all 47 species
LOC_Os04g44780.1 EXPB3, ATEXPB3,... Expansin-B17 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os04g46650.1 ATHEXP BETA 1.4,... Expansin-B5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os10g30330.1 ATEXPA11, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os10g40730.1 ATHEXP BETA 1.4,... Expansin-B4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Mp3g03890.1 ATEXPA1, EXP1,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Pir_g45904 ATEXPA10,... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g05687 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06874 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39288 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g112000.4.1 ATEXLA1, EXPL1,... alpha-like-class expansin 0.02 OrthoFinder output from all 47 species
Solyc03g115890.3.1 EXP15, ATEXPA15,... alpha-class expansin 0.06 OrthoFinder output from all 47 species
Solyc05g052250.3.1 EXPA8, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Solyc08g007780.3.1 EXPA18, EXP18,... Putative expansin-A30 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Solyc12g089380.2.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e000036_P001 ATHEXP BETA 1.4,... Expansin-B4 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Zm00001e004713_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Zm00001e004716_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e014231_P001 ATEXPA10,... Expansin-A13 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e017334_P001 ATEXPA10,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e033407_P001 ATHEXP BETA 1.1,... Expansin-B11 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e036693_P001 EXPA18, EXP18,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e038997_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0050662 obsolete coenzyme binding IEP HCCA
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 73 159
IPR007117 Expansin_CBD 171 248
No external refs found!