Aliases : AtMYB117, LOF1, MYB117
Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor
Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01019967001 | |
| Cluster | HCCA: Cluster_39 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00272410 | AtMYB98, MYB98,... | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00009p00263240 | MYB3R-1,... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G26780 | AtMYB117, LOF1, MYB117 | myb domain protein 117 | 0.05 | OrthoFinder output from all 47 species | |
| AT1G73410 | MYB54, ATMYB54 | myb domain protein 54 | 0.04 | OrthoFinder output from all 47 species | |
| AT3G29020 | MYB110, AtMYB110 | myb domain protein 110 | 0.08 | OrthoFinder output from all 47 species | |
| AT5G40360 | MYB115, AtMYB115 | myb domain protein 115 | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g02622 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g14702 | AtMYB124, MYB124, FLP | MYB class-R2R3 transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g15721 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g27407 | ATMYB3R5, MYB3R-5 | R1R2R3-MYB transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g47836 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g57490 | MYB3R-3, AtMYB3R3 | R1R2R3-MYB transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g07602 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene26178.t1 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene54282.t1 | MYB1, AtMYB1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.19G007400.1 | LOF2, MYB105,... | MYB class-R2R3 subgroup-21 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.30G050500.1 | ATMYB119,... | MYB class-R2R3 transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001042.7 | MYB1, AtMYB1 | RNA biosynthesis.transcriptional activation.MYB... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g16265 | AtMYB117, LOF1, MYB117 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g24983 | AtMYB124, MYB124, FLP | MYB class-R2R3 transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g01419 | MYB70, AtMYB70 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01010006001 | BW52, ATMYB52, MYB52 | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015370001 | MYB3R-1,... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_06298 | AtMYB117, LOF1, MYB117 | transcription factor (MYB) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g74590.1 | MYBR1, MYB44,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g17190.1 | AtMYB3R4,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os11g10130.1 | BW52, ATMYB52,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g13570.1 | MYB3R-1,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g27982 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g09604 | AtMYB124, MYB124, FLP | MYB class-R2R3 transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g18053 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g24734 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g29088 | MYB1, AtMYB1 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g29190 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g15749 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g27096 | MYB88, AtMYB88 | MYB class-R2R3 transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g098270.1.1 | LOF2, MYB105,... | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g112890.1.1 | AtMYB98, MYB98,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g079360.1.1 | MYB77, Solyc04g079360 | transcription factor (MYB) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc05g007870.3.1 | LOF2, MYB105,... | transcription factor (MYB) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g068320.3.1 | MYB3R-1,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g05755 | ATMYB3R5, MYB3R-5 | R1R2R3-MYB transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g43768 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005507_P001 | BW52, ATMYB52,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006631 | fatty acid metabolic process | IEP | HCCA |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | HCCA |
| BP | GO:0007275 | multicellular organism development | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0032501 | multicellular organismal process | IEP | HCCA |
| BP | GO:0032502 | developmental process | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| BP | GO:0048856 | anatomical structure development | IEP | HCCA |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |
