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  5. GSVIVT01020030001

GSVIVT01020030001


Description : Binding partner of ACD11 1 OS=Arabidopsis thaliana


Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020030001
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AT4G17720 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.05 OrthoFinder output from all 47 species
Adi_g088992 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50706.t1 Aspi01Gene50706 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0137.g051018 No alias not classified & original description: CDS=148-852 0.04 OrthoFinder output from all 47 species
Ceric.28G042200.1 Ceric.28G042200 not classified & original description: pacid=50570559... 0.03 OrthoFinder output from all 47 species
Dcu_g07449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g00344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g50790.1 LOC_Os04g50790 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g53330.2 LOC_Os04g53330 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os06g02240.1 LOC_Os06g02240 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g29520 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g01032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22616 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g067390.3.1 Solyc02g067390 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g00916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g28029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 10 72
No external refs found!