Aliases : SRL2, PIF4, AtPIF4
Description : External stimuli response.light.red/far red light.PIF transcriptional regulator
Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00267570 | UNE12,... | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00008p00265010 | HEC2,... | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00065p00184910 | LRL1,... | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00079p00137860 | BEE3,... | External stimuli response.light.UV-A/blue... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00110p00030150 | UNE10,... | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G05805 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT1G73830 | BEE3 | BR enhanced expression 3 | 0.03 | OrthoFinder output from all 47 species | |
| AT2G18300 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT2G43010 | SRL2, PIF4, AtPIF4 | phytochrome interacting factor 4 | 0.04 | OrthoFinder output from all 47 species | |
| AT3G57800 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G59060 | PIL6, PIF5 | phytochrome interacting factor 3-like 6 | 0.04 | OrthoFinder output from all 47 species | |
| AT4G00050 | UNE10 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| AT5G67060 | HEC1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g115453 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g10597 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g23312 | LRL3 | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g07904 | CIB1 | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g08014 | PIF3, POC1, PAP3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g04401 | SPT | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g09992 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g29567 | CIB5 | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene12606.t1 | Aspi01Gene12606 | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene12792.t1 | HEC2, Aspi01Gene12792 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene14949.t1 | LRL3, Aspi01Gene14949 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene28459.t1 | SPT, Aspi01Gene28459 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene46202.t1 | Aspi01Gene46202 | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene63646.t1 | LRL3, Aspi01Gene63646 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0043.g026959 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0197.g057308 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34527 | HEC2 | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.26G029500.1 | Ceric.26G029500 | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.32G068300.1 | Ceric.32G068300 | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g03262 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g10732 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g22699 | LRL3 | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g30817 | SPT | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g12124 | SPT | bHLH-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g25483 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g09150 | PIF3, POC1, PAP3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g18802 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01028238001 | PIF3, POC1, PAP3 | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01032055001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01037846001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_07156 | PIF3, POC1, PAP3 | transcription factor (bHLH). PIF red/far-red light... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g42100.1 | RSL2, LOC_Os03g42100 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g41229.1 | LOC_Os04g41229 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g46370.1 | LOC_Os05g46370 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g47980.1 | LOC_Os06g47980 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g39630.1 | LOC_Os08g39630 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g25040.1 | LRL1, LOC_Os09g25040 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g41650.2 | PIL5, PIF1,... | transcription factor (bHLH). PIF red/far-red light... | 0.07 | OrthoFinder output from all 47 species | |
| Len_g24250 | SPT | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g03405 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g10731 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g21546 | UNE12 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g37660 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g39067 | SPT | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10435000g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_120179g0010 | UNE12 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| MA_96671g0010 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | OrthoFinder output from all 47 species | |
| Mp3g17350.1 | SPT | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g01184 | LRL3 | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g19998 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g43162 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g06488 | CIB1 | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g38111 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g50236 | PIL5, PIF1 | regulatory protein *(PIF) of red/far-red light... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g58445 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c16_21590V3.1 | HEC2, Pp3c16_21590 | ROOT HAIR DEFECTIVE 6-LIKE 2 | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06946 | SPT | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g28847 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g62088 | CIB1 | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0038.g011925 | HEC2 | bHLH-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Smo39143 | ALC | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g010130.4.1 | Solyc01g010130 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g109700.3.1 | CIB1, Solyc01g109700 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g062690.3.1 | BEE2, Solyc02g062690 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g091440.2.1 | RHD6, Solyc02g091440 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g097820.2.1 | Solyc03g097820 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g113560.4.1 | Solyc03g113560 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g119390.4.1 | BEE3, Solyc03g119390 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g005130.3.1 | Solyc04g005130 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g005220.3.1 | Solyc04g005220 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g043580.4.1 | PIL6, PIF5,... | transcription factor (bHLH). PIF red/far-red light... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc11g005780.3.1 | HEC3, Solyc11g005780 | transcription factor (bHLH) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc12g036470.2.1 | BEE3, Solyc12g036470 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g13248 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g38881 | SPT | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e002331_P003 | UNE10, Zm00001e002331 | transcription factor (bHLH) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e005046_P003 | PIL5, PIF1,... | transcription factor (bHLH). PIF red/far-red light... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e009823_P002 | LRL1, Zm00001e009823 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e011866_P002 | UNE12, Zm00001e011866 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015610_P001 | RHD6, Zm00001e015610 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e018857_P002 | Zm00001e018857 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e025656_P001 | RHD6, Zm00001e025656 | transcription factor (bHLH) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e028489_P003 | Zm00001e028489 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e030725_P001 | Zm00001e030725 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032280_P001 | Zm00001e032280 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e034658_P003 | Zm00001e034658 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e035422_P001 | RSL4, Zm00001e035422 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e036318_P001 | LRL1, Zm00001e036318 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 342 | 388 |
| No external refs found! |
