GSVIVT01020924001


Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase


Gene families : OG0004431 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004431_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020924001

Target Alias Description ECC score Gene Family Method Actions
AT4G13780 No alias methionine--tRNA ligase, putative / methionyl-tRNA... 0.05 OrthoFinder output from all 47 species
Aev_g06133 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.04 OrthoFinder output from all 47 species
Aob_g02309 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0128.g048806 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.08G035400.1 Ceric.08G035400 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Cre02.g087950 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
LOC_Os06g31210.1 LOC_Os06g31210 methionine-tRNA ligase 0.04 OrthoFinder output from all 47 species
MA_10427001g0020 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
MA_10436199g0010 No alias methionine-tRNA ligase 0.05 OrthoFinder output from all 47 species
Ore_g20121 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.04 OrthoFinder output from all 47 species
Smo164891 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
Spa_g12729 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.07 OrthoFinder output from all 47 species
Tin_g12163 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.04 OrthoFinder output from all 47 species
Zm00001e000847_P001 Zm00001e000847 methionine-tRNA ligase 0.05 OrthoFinder output from all 47 species
Zm00001e038714_P001 Zm00001e038714 methionine-tRNA ligase 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR015413 Methionyl/Leucyl_tRNA_Synth 25 419
IPR002547 tRNA-bd_dom 793 887
No external refs found!