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  5. GSVIVT01021086001

GSVIVT01021086001


Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.DOF transcription factor


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021086001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00232310 ADOF2, DOF2,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00058p00210070 TMO6,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00059p00213350 ADOF1, DOF1,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00069p00049300 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00119p00099150 CDF2,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00160p00046100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AT1G69570 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT2G28510 No alias Dof-type zinc finger DNA-binding family protein 0.07 OrthoFinder output from all 47 species
AT2G28810 No alias Dof-type zinc finger DNA-binding family protein 0.04 OrthoFinder output from all 47 species
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT2G46590 DAG2 Dof-type zinc finger DNA-binding family protein 0.07 OrthoFinder output from all 47 species
AT3G21270 ADOF2, DOF2 DOF zinc finger protein 2 0.02 OrthoFinder output from all 47 species
AT3G55370 OBP3 OBF-binding protein 3 0.04 OrthoFinder output from all 47 species
AT3G61850 DAG1 Dof-type zinc finger DNA-binding family protein 0.05 OrthoFinder output from all 47 species
AT4G00940 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT4G24060 No alias Dof-type zinc finger DNA-binding family protein 0.04 OrthoFinder output from all 47 species
AT5G02460 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT5G60850 OBP4 OBF binding protein 4 0.02 OrthoFinder output from all 47 species
Adi_g022623 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069664 OBP3 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g071021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075098 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098160 CDF2 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06704 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03761 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06838 DAG1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13677 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16400 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01888 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03146 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03156 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04849 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11020 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11555 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20563 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27376 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39186 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51755 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02136 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04142 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12101 CDF2 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14647 ADOF2, DOF2 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18797 OBP3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25388 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67430 TMO6 transcription factor *(DOF) & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene13553.t1 CDF3, Aspi01Gene13553 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26374.t1 Aspi01Gene26374 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0008.g011464 No alias not classified & original description: CDS=1-2679 0.03 OrthoFinder output from all 47 species
Azfi_s1074.g096912 TMO6 transcription factor *(DOF) & original description: CDS=1-1176 0.04 OrthoFinder output from all 47 species
Cba_g06470 CDF2 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19275 CDF3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26303 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34327 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g71501 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g72531 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G055200.1 TMO6, Ceric.09G055200 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.19G013700.1 TMO6, Ceric.19G013700 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.30G042800.1 OBP3, Ceric.30G042800 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g11850 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40320 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43968 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19391 CDF2 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26758 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03345 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09129 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12009 DOF2.4, ATDOF2.4 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g12722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14537 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14972 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26839 CDF1 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g27889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g28279 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30636 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30637 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Gb_20144 HCA2, DOF5.6 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os01g48290.1 LOC_Os01g48290 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os03g16850.1 OBP3, LOC_Os03g16850 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os03g38870.1 LOC_Os03g38870 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os03g55610.1 ADOF2, DOF2,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os03g60630.1 LOC_Os03g60630 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os04g47990.1 LOC_Os04g47990 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os07g13260.1 OBP3, LOC_Os07g13260 transcription factor (DOF) 0.07 OrthoFinder output from all 47 species
LOC_Os07g32510.1 TMO6, LOC_Os07g32510 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os07g48570.1 CDF2, LOC_Os07g48570 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os12g38200.1 LOC_Os12g38200 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Lfl_g06630 OBP3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16402 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g26281 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
MA_459791g0010 TMO6 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
MA_46520g0010 No alias transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
MA_944867g0010 No alias transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Mp2g20790.1 TMO6 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Msp_g12603 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31889 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32354 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03668 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07392 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38953 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05845 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05846 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27267 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30866 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33176 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41543 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01905 DOF2.4, ATDOF2.4 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06642 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10327 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14293 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19390 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g24818 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46456 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06441 CDF2 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26562 CDF2 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05155 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31297 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53347 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61765 DAG1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007584 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=1-1335 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008681 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=453-2084 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008715 TMO6 transcription factor *(DOF) & original description: CDS=1-1413 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g008984 No alias transcription factor *(DOF) & original description: CDS=332-1984 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012148 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=1-1128 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012351 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=1-1632 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012870 TMO6 transcription factor *(DOF) & original description: CDS=1-1464 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020125 No alias transcription factor *(DOF) & original description: CDS=124-2595 0.02 OrthoFinder output from all 47 species
Sam_g43145 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49468 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Smo89924 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Solyc01g096120.3.1 DAG1, Solyc01g096120 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc02g077950.3.1 Solyc02g077950 transcription factor (DOF) 0.06 OrthoFinder output from all 47 species
Solyc02g077960.3.1 TMO6, Solyc02g077960 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc02g078620.1.1 ADOF2, DOF2,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc03g115940.4.1 CDF3, Solyc03g115940 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Solyc03g121400.1.1 ADOF2, DOF2,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc06g071480.3.1 HCA2, DOF5.6,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc08g082910.2.1 Solyc08g082910 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Solyc09g010680.3.1 Solyc09g010680 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Solyc10g009360.4.1 DAG1, Solyc10g009360 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc10g086440.2.1 DOF2.4,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc11g066050.1.1 Solyc11g066050 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc11g072500.2.1 TMO6, Solyc11g072500 transcription factor (DOF) 0.06 OrthoFinder output from all 47 species
Spa_g09440 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12133 CDF2 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g41104 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49511 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20763 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000526_P001 CDF3, Zm00001e000526 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e002951_P002 Zm00001e002951 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e003086_P001 ADOF1, DOF1,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e004476_P002 Zm00001e004476 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e005107_P001 ADOF1, DOF1,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e005785_P001 ADOF2, DOF2,... transcription factor (DOF) 0.06 OrthoFinder output from all 47 species
Zm00001e006190_P001 Zm00001e006190 transcription factor (DOF) 0.06 OrthoFinder output from all 47 species
Zm00001e010454_P001 TMO6, Zm00001e010454 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Zm00001e011750_P002 Zm00001e011750 transcription factor (DOF) 0.07 OrthoFinder output from all 47 species
Zm00001e015414_P004 Zm00001e015414 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e015597_P001 HCA2, DOF5.6,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e018163_P001 Zm00001e018163 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e023218_P004 Zm00001e023218 transcription factor (DOF) 0.07 OrthoFinder output from all 47 species
Zm00001e023334_P001 HCA2, DOF5.6,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e027634_P002 OBP3, Zm00001e027634 transcription factor (DOF) 0.06 OrthoFinder output from all 47 species
Zm00001e028672_P001 Zm00001e028672 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e029641_P001 OBP3, Zm00001e029641 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Zm00001e035074_P001 TMO6, Zm00001e035074 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e038479_P002 OBP3, Zm00001e038479 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e041444_P001 Zm00001e041444 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e041944_P001 Zm00001e041944 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 108 164
No external refs found!